ENSGALG00000000533


Gallus gallus

Features
Gene ID: ENSGALG00000000533
  
Biological name :SRSF3
  
Synonyms : serine and arginine rich splicing factor 3 / SRSF3
  
Possible biological names infered from orthology : Gm12355 / P84103 / P84104 / serine/arginine-rich splicing factor 3
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 1573430
Gene end: 1579366
  
Corresponding Affymetrix probe sets: Gga.13500.1.S1_at (Chicken Array)   Gga.13905.1.S1_s_at (Chicken Array)   Gga.4718.1.S1_at (Chicken Array)   Gga.4718.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000734
Ensembl peptide - ENSGALP00000043403
NCBI entrez gene - 419815     See in Manteia.
RefSeq - NM_001195554
RefSeq Peptide - NP_001182483
swissprot - E1C8Y9
Ensembl - ENSGALG00000000533
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf3aENSDARG00000100815Danio rerio
 srsf3aENSDARG00000025397Danio rerio
 srsf3bENSDARG00000059360Danio rerio
 SRSF3ENSG00000112081Homo sapiens
 Gm12355ENSMUSG00000078134Mus musculus
 Srsf3ENSMUSG00000071172Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRSF7* / Q16629* / Q8BL97* / serine/arginine-rich splicing factor 7* / serine and arginine rich splicing factor 7*ENSGALG0000003852855
SRSF7 / Q16629* / Q8BL97* / serine/arginine-rich splicing factor 7* / serine and arginine rich splicing factor 7*ENSGALG0000003312054


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048024 regulation of mRNA splicing, via spliceosome IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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