ENSMUSG00000024097


Mus musculus

Features
Gene ID: ENSMUSG00000024097
  
Biological name :Srsf7
  
Synonyms : Q8BL97 / serine/arginine-rich splicing factor 7 / Srsf7
  
Possible biological names infered from orthology : Q16629 / serine and arginine rich splicing factor 7
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: E3
Gene start: 80200089
Gene end: 80207305
  
Corresponding Affymetrix probe sets: 10453102 (MoGene1.0st)   1424033_at (Mouse Genome 430 2.0 Array)   1424883_s_at (Mouse Genome 430 2.0 Array)   1436871_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000070983
NCBI entrez gene - 225027     See in Manteia.
MGI - MGI:1926232
RefSeq - NM_001195487
RefSeq - NM_146083
RefSeq - XM_011246413
RefSeq - NM_001195485
RefSeq - NM_001195486
RefSeq - XM_006524190
RefSeq - XM_006524191
RefSeq - XM_011246412
RefSeq Peptide - NP_001182414
RefSeq Peptide - NP_001182415
RefSeq Peptide - NP_001182416
RefSeq Peptide - NP_666195
swissprot - Q3THA6
swissprot - Q8BL97
Ensembl - ENSMUSG00000024097
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf7bENSDARG00000101057Danio rerio
 ENSGALG00000038528Gallus gallus
 SRSF7ENSGALG00000033120Gallus gallus
 SRSF7ENSG00000115875Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Srsf3 / P84104 / serine/arginine-rich splicing factor 3 / P84103* / serine and arginine rich splicing factor 3*ENSMUSG0000007117238
Gm12355ENSMUSG0000007813436


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001878  Zinc finger, CCHC-type
 IPR034651  SRSF7, RNA recognition motif
 IPR035979  RNA-binding domain superfamily
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing ISO
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1ltm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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