ENSG00000115020


Homo sapiens

Features
Gene ID: ENSG00000115020
  
Biological name :PIKFYVE
  
Synonyms : phosphoinositide kinase, FYVE-type zinc finger containing / PIKFYVE / Q9Y2I7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q34
Gene start: 208266267
Gene end: 208358751
  
Corresponding Affymetrix probe sets: 1553917_at (Human Genome U133 Plus 2.0 Array)   1557719_at (Human Genome U133 Plus 2.0 Array)   213111_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000405736
Ensembl peptide - ENSP00000384356
Ensembl peptide - ENSP00000407692
Ensembl peptide - ENSP00000414477
Ensembl peptide - ENSP00000264380
Ensembl peptide - ENSP00000308715
Ensembl peptide - ENSP00000376038
NCBI entrez gene - 200576     See in Manteia.
OMIM - 609414
RefSeq - XM_017003574
RefSeq - XM_011510792
RefSeq - XM_017003568
RefSeq - XM_017003569
RefSeq - XM_017003570
RefSeq - XM_017003571
RefSeq - XM_017003572
RefSeq - XM_017003573
RefSeq - NM_001178000
RefSeq - NM_015040
RefSeq - NM_152671
RefSeq - XM_011510778
RefSeq - XM_011510779
RefSeq - XM_011510780
RefSeq - XM_011510781
RefSeq - XM_011510782
RefSeq - XM_011510783
RefSeq - XM_011510784
RefSeq - XM_011510785
RefSeq - XM_011510786
RefSeq - XM_011510787
RefSeq - XM_011510788
RefSeq - XM_011510789
RefSeq - XM_011510790
RefSeq Peptide - NP_689884
RefSeq Peptide - NP_001171471
RefSeq Peptide - NP_055855
swissprot - C9JL08
swissprot - Q9Y2I7
swissprot - F8WEZ0
swissprot - E9PDH4
Ensembl - ENSG00000115020
  
Related genetic diseases (OMIM): 121850 - Corneal fleck dystrophy, 121850
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pikfyveENSDARG00000056112Danio rerio
 PIKFYVEENSGALG00000008842Gallus gallus
 Q9Z1T6ENSMUSG00000025949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7Z3T8 / ZFYVE16 / zinc finger FYVE-type containing 16ENSG000000393199
O95405 / ZFYVE9 / zinc finger FYVE-type containing 9ENSG000001570779
Q9HCC9 / ZFYVE28 / zinc finger FYVE-type containing 28ENSG000001597334
Q9BQ24 / ZFYVE21 / zinc finger FYVE-type containing 21ENSG000001007113


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR000591  DEP domain
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR002498  Phosphatidylinositol-4-phosphate 5-kinase, core
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related
 IPR027409  GroEL-like apical domain superfamily
 IPR027410  TCP-1-like chaperonin intermediate domain superfamily
 IPR027483  Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
 IPR027484  Phosphatidylinositol-4-phosphate 5-kinase, N-terminal
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily
 IPR037378  PIKfyve, DEP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006661 phosphatidylinositol biosynthetic process TAS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0032288 myelin assembly IEA
 biological_processGO:0034504 protein localization to nucleus IMP
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0036092 phosphatidylinositol-3-phosphate biosynthetic process IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IMP
 biological_processGO:0046488 phosphatidylinositol metabolic process IEA
 biological_processGO:0046854 phosphatidylinositol phosphorylation IEA
 biological_processGO:1904562 phosphatidylinositol 5-phosphate metabolic process IC
 biological_processGO:2000785 regulation of autophagosome assembly IMP
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0012506 vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031901 early endosome membrane TAS
 cellular_componentGO:0031902 late endosome membrane TAS
 cellular_componentGO:0045121 membrane raft IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016307 phosphatidylinositol phosphate kinase activity IEA
 molecular_functionGO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the Golgi membrane
Synthesis of PIPs at the early endosome membrane
Synthesis of PIPs at the late endosome membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0007962 Speckled corneal dystrophy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000112367 FIG4 / Q92562 / FIG4 phosphoinositide 5-phosphatase  / complex
 ENSG00000103043 VAC14 / Q08AM6 / Vac14, PIKFYVE complex component  / complex






 

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