ENSG00000116918


Homo sapiens

Features
Gene ID: ENSG00000116918
  
Biological name :TSNAX
  
Synonyms : Q99598 / translin associated factor X / TSNAX
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q42.2
Gene start: 231528653
Gene end: 231566524
  
Corresponding Affymetrix probe sets: 203983_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355599
Ensembl peptide - ENSP00000397537
NCBI entrez gene - 7257     See in Manteia.
OMIM - 602964
RefSeq - NM_005999
RefSeq Peptide - NP_005990
swissprot - A0A024R3V8
swissprot - Q5VVQ1
swissprot - Q99598
Ensembl - ENSG00000116918
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tsnaxENSDARG00000115282Danio rerio
 TSNAXENSGALG00000037177Gallus gallus
 TsnaxENSMUSG00000056820Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TSNAX-DISC1 / TSNAX-DISC1 readthrough (NMD candidate)ENSG0000027010658


Protein motifs (from Interpro)
Interpro ID Name
 IPR002848  Translin family
 IPR016068  Translin, N-terminal
 IPR036081  Translin superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030422 production of siRNA involved in RNA interference TAS
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008565 protein transporter activity TAS
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Small interfering RNA (siRNA) biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000116918 TSNAX / Q99598 / translin associated factor X  / complex
 ENSG00000123908 AGO2 / Q9UKV8 / argonaute 2, RISC catalytic component  / reaction
 ENSG00000211460 TSN / Q15631 / translin  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr