ENSMUSG00000056820


Mus musculus

Features
Gene ID: ENSMUSG00000056820
  
Biological name :Tsnax
  
Synonyms : Q9QZE7 / Translin-associated protein X / Tsnax
  
Possible biological names infered from orthology : Q99598 / translin associated factor X / TSNAX-DISC1 / TSNAX-DISC1 readthrough (NMD candidate)
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: E2
Gene start: 125012997
Gene end: 125034192
  
Corresponding Affymetrix probe sets: 10576532 (MoGene1.0st)   1423395_at (Mouse Genome 430 2.0 Array)   1430045_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148470
Ensembl peptide - ENSMUSP00000075290
NCBI entrez gene - 53424     See in Manteia.
MGI - MGI:1855672
RefSeq - NM_016909
RefSeq Peptide - NP_058605
swissprot - A0A1D5RLR0
swissprot - Q9QZE7
Ensembl - ENSMUSG00000056820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tsnaxENSDARG00000115282Danio rerio
 TSNAXENSGALG00000037177Gallus gallus
 TSNAXENSG00000116918Homo sapiens
 TSNAX-DISC1ENSG00000270106Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002848  Translin family
 IPR016068  Translin, N-terminal
 IPR036081  Translin superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031687 A2A adenosine receptor binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Small interfering RNA (siRNA) biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000026374 Tsn / Q62348 / translin / Q15631*  / complex
 ENSMUSG00000056820 Tsnax / Q9QZE7 / Translin-associated protein X / Q99598* / TSNAX-DISC1* / translin associated factor X* / TSNAX-DISC1 readthrough (NMD candidate)*  / complex
 ENSMUSG00000036698 Ago2 / Q8CJG0 / Protein argonaute-2 / Q9UKV8* / argonaute 2, RISC catalytic component*  / reaction






 

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