ENSG00000120913


Homo sapiens

Features
Gene ID: ENSG00000120913
  
Biological name :PDLIM2
  
Synonyms : PDLIM2 / PDZ and LIM domain 2 / Q96JY6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: p21.3
Gene start: 22578279
Gene end: 22598025
  
Corresponding Affymetrix probe sets: 219165_at (Human Genome U133 Plus 2.0 Array)   232302_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000392920
Ensembl peptide - ENSP00000394376
Ensembl peptide - ENSP00000481268
Ensembl peptide - ENSP00000481074
Ensembl peptide - ENSP00000479453
Ensembl peptide - ENSP00000478826
Ensembl peptide - ENSP00000478370
Ensembl peptide - ENSP00000477546
Ensembl peptide - ENSP00000412936
Ensembl peptide - ENSP00000407643
Ensembl peptide - ENSP00000401992
Ensembl peptide - ENSP00000397738
Ensembl peptide - ENSP00000265810
Ensembl peptide - ENSP00000312634
Ensembl peptide - ENSP00000342035
Ensembl peptide - ENSP00000380867
Ensembl peptide - ENSP00000380868
Ensembl peptide - ENSP00000386868
Ensembl peptide - ENSP00000387084
NCBI entrez gene - 64236     See in Manteia.
OMIM - 609722
RefSeq - NM_176871
RefSeq - NM_198042
RefSeq - NM_021630
RefSeq Peptide - NP_067643
RefSeq Peptide - NP_789847
RefSeq Peptide - NP_932159
swissprot - A0A087WXJ0
swissprot - A0A087WVI1
swissprot - A0A087WUQ1
swissprot - A0A087WU48
swissprot - F8WFB8
swissprot - C9K0F0
swissprot - Q96JY6
swissprot - C9JSR2
swissprot - C9JS55
swissprot - C9J760
swissprot - C9J0X3
swissprot - B3KPU0
Ensembl - ENSG00000120913
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdlim2ENSDARG00000069956Danio rerio
 Pdlim2ENSMUSG00000022090Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O00151 / PDLIM1 / PDZ and LIM domain 1ENSG0000010743819
P50479 / PDLIM4 / PDZ and LIM domain 4ENSG0000013143518
PDLIM3 / Q53GG5 / PDZ and LIM domain 3ENSG0000015455316


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001781  Zinc finger, LIM-type
 IPR031847  Domain of unknown function DUF4749
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr