ENSG00000124275


Homo sapiens

Features
Gene ID: ENSG00000124275
  
Biological name :MTRR
  
Synonyms : 5-methyltetrahydrofolate-homocysteine methyltransferase reductase / MTRR / Q9UBK8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: p15.31
Gene start: 7851186
Gene end: 7906025
  
Corresponding Affymetrix probe sets: 203199_s_at (Human Genome U133 Plus 2.0 Array)   203200_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424599
Ensembl peptide - ENSP00000427416
Ensembl peptide - ENSP00000427200
Ensembl peptide - ENSP00000426710
Ensembl peptide - ENSP00000426132
Ensembl peptide - ENSP00000424719
Ensembl peptide - ENSP00000424644
Ensembl peptide - ENSP00000264668
Ensembl peptide - ENSP00000402510
Ensembl peptide - ENSP00000421318
Ensembl peptide - ENSP00000421991
Ensembl peptide - ENSP00000423139
Ensembl peptide - ENSP00000423863
NCBI entrez gene - 4552     See in Manteia.
OMIM - 602568
RefSeq - NM_002454
RefSeq - NM_024010
RefSeq Peptide - NP_002445
RefSeq Peptide - NP_076915
swissprot - H0Y8S9
swissprot - H0Y963
swissprot - H0Y9D5
swissprot - H0Y9Q0
swissprot - D6RIS8
swissprot - Q9UBK8
swissprot - D6RGC7
swissprot - D6RF21
swissprot - D6RAZ2
swissprot - D6RAY3
Ensembl - ENSG00000124275
  
Related genetic diseases (OMIM): 236270 - Homocystinuria-megaloblastic anemia, cbl E type, 236270
  601634 - {Neural tube defects, folate-sensitive, susceptibility to}, 601634
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mtrrENSDARG00000045398Danio rerio
 MTRRENSGALG00000039424Gallus gallus
 MtrrENSMUSG00000034617Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NDOR1 / Q9UHB4 / NADPH dependent diflavin oxidoreductase 1ENSG0000018856624


Protein motifs (from Interpro)
Interpro ID Name
 IPR001094  Flavodoxin-like
 IPR001433  Oxidoreductase FAD/NAD(P)-binding
 IPR001709  Flavoprotein pyridine nucleotide cytochrome reductase
 IPR003097  FAD-binding, type 1
 IPR008254  Flavodoxin/nitric oxide synthase
 IPR017927  Ferredoxin reductase-type FAD-binding domain
 IPR017938  Riboflavin synthase-like beta-barrel
 IPR029039  Flavoprotein-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000096 sulfur amino acid metabolic process TAS
 biological_processGO:0006306 DNA methylation ISS
 biological_processGO:0006555 methionine metabolic process TAS
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0009086 methionine biosynthetic process IDA
 biological_processGO:0009235 cobalamin metabolic process TAS
 biological_processGO:0032259 methylation TAS
 biological_processGO:0033353 S-adenosylmethionine cycle ISS
 biological_processGO:0043418 homocysteine catabolic process IDA
 biological_processGO:0046655 folic acid metabolic process ISS
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:1904042 negative regulation of cystathionine beta-synthase activity IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0003958 NADPH-hemoprotein reductase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0010181 FMN binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016723 oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor IDA
 molecular_functionGO:0030586 [methionine synthase] reductase activity IDA
 molecular_functionGO:0050444 aquacobalamin reductase (NADPH) activity IDA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding TAS
 molecular_functionGO:0050661 NADP binding TAS
 molecular_functionGO:0070402 NADPH binding IDA
 molecular_functionGO:0071949 FAD binding IDA


Pathways (from Reactome)
Pathway description
Methylation
Sulfur amino acid metabolism
Cobalamin (Cbl, vitamin B12) transport and metabolism
Defective MTRR causes methylmalonic aciduria and homocystinuria type cblE
Defective MTR causes methylmalonic aciduria and homocystinuria type cblG


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001889 Megaloblastic anemia 
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 HP:0001903 Anemia 
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 HP:0002059 Cerebral atrophy 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002156 Homocystinuria 
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 HP:0002160 Homocystinemia 
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 HP:0003223 Decreased methylcobalamin (MECBL) 
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 HP:0003524 Decreased methionine synthase (MTR, 156570) activity 
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 HP:0003593 Early onset 
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 HP:0003658 Decreased serum methionine 
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 HP:0006887 Mental retardation, progressive "Mental retardation is defined as a decreased intelligence quotient of varying degree. The term progressive mental retardation should be used if intelligence decreases/deteriorates over time." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000116984 MTR / Q99707 / 5-methyltetrahydrofolate-homocysteine methyltransferase  / complex






 

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