ENSG00000125744


Homo sapiens

Features
Gene ID: ENSG00000125744
  
Biological name :RTN2
  
Synonyms : O75298 / reticulon 2 / RTN2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.32
Gene start: 45485289
Gene end: 45497061
  
Corresponding Affymetrix probe sets: 204217_s_at (Human Genome U133 Plus 2.0 Array)   34408_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468144
Ensembl peptide - ENSP00000466619
Ensembl peptide - ENSP00000467863
Ensembl peptide - ENSP00000245923
Ensembl peptide - ENSP00000345127
Ensembl peptide - ENSP00000398178
NCBI entrez gene - 6253     See in Manteia.
OMIM - 603183
RefSeq - NM_005619
RefSeq - NM_206900
RefSeq - NM_206901
RefSeq Peptide - NP_996784
RefSeq Peptide - NP_005610
RefSeq Peptide - NP_996783
swissprot - Q96CG9
swissprot - O75298
swissprot - K7EMR7
swissprot - Q7RTN0
Ensembl - ENSG00000125744
  
Related genetic diseases (OMIM): 604805 - Spastic paraplegia 12, autosomal dominant, 604805
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn2aENSDARG00000016088Danio rerio
 rtn2bENSDARG00000057027Danio rerio
 Rtn2ENSMUSG00000030401Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RTN1 / Q16799 / reticulon 1ENSG0000013997028
RTN4 / Q9NQC3 / reticulon 4ENSG0000011531028
RTN3 / O95197 / reticulon 3ENSG0000013331825


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046324 regulation of glucose import IEA
 biological_processGO:0065002 intracellular protein transmembrane transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0014802 terminal cisterna IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane NAS
 cellular_componentGO:0030315 T-tubule IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000012 Urinary urgency 
Show

 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
Show

 HP:0001258 Spastic paraplegia 
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0001761 Pes cavus 
Show

 HP:0002064 Spastic gait 
Show

 HP:0002070 Limb ataxia 
Show

 HP:0002166 Decreased vibratory sense in the lower limbs "A decrease in the ability to perceive vibration in the legs." [HPO:curators]
Show

 HP:0002169 Clonus 
Show

 HP:0002314 Degeneration of the lateral corticospinal tracts 
Show

 HP:0002355 Difficulty walking 
Show

 HP:0002607 Bowel incontinence 
Show

 HP:0002839 Sphincter disturbances (bladder) 
Show

 HP:0003394 Muscle cramps 
Show

 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
Show

 HP:0003676 Progressive disorder 
Show

 HP:0007020 Progressive spastic paraplegia 
Show

 HP:0007210 Lower limb hypotrophy 
Show

 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
Show

 HP:0007350 Hyperreflexia in upper limbs 
Show

 HP:0008075 Progressive pes cavus 
Show

 HP:0010831 Impaired proprioception "A loss or impairment of the sensation of the relative position of parts of the body and joint position." [HPO:probinson]
Show

 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
Show

 HP:0011449 Knee clonus ".Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Knee clonus can be tested by rapidly pushing the patella towards the toes." [HPO:probinson]
Show

 HP:0030014 Female sexual dysfunction 
Show

 HP:0040307 Male sexual dysfunction 
Show

 HP:0100561 Spinal cord lesions 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr