ENSG00000139970


Homo sapiens

Features
Gene ID: ENSG00000139970
  
Biological name :RTN1
  
Synonyms : Q16799 / reticulon 1 / RTN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q23.1
Gene start: 59595976
Gene end: 59870966
  
Corresponding Affymetrix probe sets: 203485_at (Human Genome U133 Plus 2.0 Array)   210222_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000483039
Ensembl peptide - ENSP00000267484
Ensembl peptide - ENSP00000340716
Ensembl peptide - ENSP00000378525
NCBI entrez gene - 6252     See in Manteia.
OMIM - 600865
RefSeq - XM_017021578
RefSeq - NM_021136
RefSeq - NM_206852
RefSeq Peptide - NP_066959
RefSeq Peptide - NP_996734
swissprot - Q16799
swissprot - Q2NKQ5
swissprot - A8MT72
Ensembl - ENSG00000139970
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn1aENSDARG00000006497Danio rerio
 rtn1bENSDARG00000021143Danio rerio
 RTN1ENSGALG00000012006Gallus gallus
 Rtn1ENSMUSG00000021087Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RTN4 / Q9NQC3 / reticulon 4ENSG0000011531030
RTN3 / O95197 / reticulon 3ENSG0000013331825
RTN2 / O75298 / reticulon 2ENSG0000012574420


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr