ENSMUSG00000021087


Mus musculus

Features
Gene ID: ENSMUSG00000021087
  
Biological name :Rtn1
  
Synonyms : Q8K0T0 / reticulon 1 / Rtn1
  
Possible biological names infered from orthology : Q16799
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: C3
Gene start: 72211752
Gene end: 72409054
  
Corresponding Affymetrix probe sets: 10400926 (MoGene1.0st)   1429761_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000021497
Ensembl peptide - ENSMUSP00000077594
Ensembl peptide - ENSMUSP00000120033
NCBI entrez gene - 104001     See in Manteia.
MGI - MGI:1933947
RefSeq - XM_006515324
RefSeq - NM_001007596
RefSeq - NM_001286448
RefSeq - NM_153457
RefSeq - XM_006515323
RefSeq Peptide - NP_703187
RefSeq Peptide - NP_001273377
RefSeq Peptide - NP_001007597
swissprot - A3QM89
swissprot - Q7M6W1
swissprot - Q4FJL2
swissprot - Q8K0T0
Ensembl - ENSMUSG00000021087
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn1aENSDARG00000006497Danio rerio
 rtn1bENSDARG00000021143Danio rerio
 RTN1ENSGALG00000012006Gallus gallus
 RTN1ENSG00000139970Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rtn4 / Q99P72 / reticulon 4 / Q9NQC3*ENSMUSG0000002045829
Rtn3 / Q9ES97 / Reticulon-3 / O95197*ENSMUSG0000002475823
Rtn2 / O70622 / reticulon 2 (Z-band associated protein) / O75298* / reticulon 2*ENSMUSG0000003040118


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005790 smooth endoplasmic reticulum ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr