ENSGALG00000012006


Gallus gallus

Features
Gene ID: ENSGALG00000012006
  
Biological name :RTN1
  
Synonyms : reticulon-1 / RTN1
  
Possible biological names infered from orthology : Q16799 / Q8K0T0
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 54764636
Gene end: 54860538
  
Corresponding Affymetrix probe sets: Gga.4420.1.S1_x_at (Chicken Array)   Gga.4420.2.S1_at (Chicken Array)   Gga.4420.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019568
Ensembl peptide - ENSGALP00000062244
Ensembl peptide - ENSGALP00000044079
Ensembl peptide - ENSGALP00000019567
NCBI entrez gene - 378791     See in Manteia.
RefSeq - NM_001001466
RefSeq - XM_015287270
RefSeq Peptide - NP_001001466
swissprot - A0A1L1RTU6
swissprot - F1NH23
swissprot - A0A1D5NUR1
swissprot - F1NH22
Ensembl - ENSGALG00000012006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn1aENSDARG00000006497Danio rerio
 rtn1bENSDARG00000021143Danio rerio
 RTN1ENSG00000139970Homo sapiens
 Rtn1ENSMUSG00000021087Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RTN4 / reticulon 4 / Q99P72* / Q9NQC3*ENSGALG0000002926124


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr