ENSGALG00000029261


Gallus gallus

Features
Gene ID: ENSGALG00000029261
  
Biological name :RTN4
  
Synonyms : reticulon 4 / RTN4
  
Possible biological names infered from orthology : Q99P72 / Q9NQC3
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 2502537
Gene end: 2561539
  
Corresponding Affymetrix probe sets: Gga.19471.1.S1_at (Chicken Array)   Gga.4205.1.S1_a_at (Chicken Array)   Gga.4205.2.S1_at (Chicken Array)   Gga.4205.3.S1_a_at (Chicken Array)   GgaAffx.21054.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044481
Ensembl peptide - ENSGALP00000063626
Ensembl peptide - ENSGALP00000054768
Ensembl peptide - ENSGALP00000050704
Ensembl peptide - ENSGALP00000047973
Ensembl peptide - ENSGALP00000045424
NCBI entrez gene - 378790     See in Manteia.
RefSeq - XM_015283346
RefSeq - NM_001277087
RefSeq - XM_015283342
RefSeq - XM_015283343
RefSeq - XM_015283344
RefSeq - XM_015283345
RefSeq Peptide - NP_001264016
swissprot - A0A1D5PPG9
swissprot - A0A1L1RXR7
swissprot - A0A1D5P5K2
swissprot - A0A1D5NYG6
swissprot - A0A1D5NVV2
swissprot - A0A1D5PD62
Ensembl - ENSGALG00000029261
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn4aENSDARG00000044601Danio rerio
 rtn4bENSDARG00000104347Danio rerio
 RTN4ENSG00000115310Homo sapiens
 Rtn4ENSMUSG00000020458Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RTN1 / reticulon-1 / Q16799* / Q8K0T0*ENSGALG0000001200617


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007413 axonal fasciculation IEA
 biological_processGO:0010634 positive regulation of epithelial cell migration IEA
 biological_processGO:0021801 cerebral cortex radial glia guided migration IEA
 biological_processGO:0030308 negative regulation of cell growth IEA
 biological_processGO:0030517 negative regulation of axon extension IEA
 biological_processGO:0033601 positive regulation of mammary gland epithelial cell proliferation IEA
 biological_processGO:0048694 positive regulation of collateral sprouting of injured axon IEA
 biological_processGO:0050821 protein stabilization IEA
 biological_processGO:0051292 nuclear pore complex assembly IEA
 biological_processGO:0051897 positive regulation of protein kinase B signaling IEA
 biological_processGO:0051960 regulation of nervous system development IEA
 biological_processGO:0060317 cardiac epithelial to mesenchymal transition IEA
 biological_processGO:0071786 endoplasmic reticulum tubular network organization IEA
 biological_processGO:0071787 endoplasmic reticulum tubular network formation IEA
 biological_processGO:1903860 negative regulation of dendrite extension IEA
 biological_processGO:1905552 positive regulation of protein localization to endoplasmic reticulum IEA
 biological_processGO:1905580 positive regulation of ERBB3 signaling pathway IEA
 biological_processGO:1905943 negative regulation of formation of growth cone in injured axon IEA
 biological_processGO:1990809 endoplasmic reticulum tubular network membrane organization IEA
 biological_processGO:2000172 regulation of branching morphogenesis of a nerve IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0044294 dendritic growth cone IEA
 cellular_componentGO:0071782 endoplasmic reticulum tubular network IEA
 cellular_componentGO:0098826 endoplasmic reticulum tubular network membrane IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Axonal growth inhibition (RHOA activation)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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