| ZFA:0000008 | brain | brain decreased size , abnormal |
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| ZFA:0000022 | floor plate | floor plate anterior region deformed , abnormal |
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| ZFA:0000032 | hypothalamus | hypothalamus deformed , abnormal |
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| ZFA:0000048 | olfactory placode | olfactory placode morphology , abnormal |
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| ZFA:0000075 | spinal cord | spinal cord has fewer parts of type motor neuron , abnormal |
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| ZFA:0000107 | eye | eye decreased size , abnormal |
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| ZFA:0000109 | forebrain | forebrain deformed , abnormal
forebrain decreased size , abnormal
forebrain flattened , abnormal |
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| ZFA:0000110 | fourth ventricle | fourth ventricle deformed , abnormal |
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| ZFA:0000135 | notochord | notochord undulate , abnormal
notochord curved , abnormal |
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| ZFA:0000152 | retina | retina has fewer parts of type retinal ganglion cell , abnormal |
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| ZFA:0000243 | neuromast | neuromast displaced , abnormal |
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| ZFA:0000405 | cranial nerve III | cranial nerve III absent , abnormal |
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| ZFA:0000435 | cranial nerve II | cranial nerve II immature , abnormal
cranial nerve II axon regeneration disrupted , abnormal
cranial nerve II has fewer parts of type retinal ganglion cell axon, abnormal |
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| ZFA:0000445 | optic tectum | optic tectum mislocalised anteriorly , abnormal
optic tectum decreased size , abnormal
optic tectum has fewer parts of type retinal ganglion cell neuron projection, abnormal |
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| ZFA:0000600 | cranial nerve IV | cranial nerve IV absent , abnormal |
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| ZFA:0000653 | dorsal thalamus | dorsal thalamus deformed , abnormal |
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| ZFA:0001058 | caudal fin | caudal fin curved ventral , abnormal
caudal fin decreased thickness , abnormal |
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| ZFA:0001114 | head | head decreased size , abnormal
head altered number of neuromast , abnormal |
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| ZFA:0001161 | pectoral fin | pectoral fin aplastic/hypoplastic , abnormal |
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| ZFA:0001273 | ventral mandibular arch | ventral mandibular arch absent , abnormal |
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| ZFA:0001613 | pharyngeal arch 3-7 | pharyngeal arch 3-7 absent , abnormal |
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| ZFA:0001655 | pericardial cavity | pericardial cavity inflated , abnormal |
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| ZFA:0001678 | immature eye | immature eye decreased size , abnormal |
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| ZFA:0009310 | retinal ganglion cell | retinal ganglion cell immature , abnormal
retinal ganglion cell neuron projection immature , abnormal
retinal ganglion cell axon guidance process quality , abnormal |
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