ENSMUSG00000024758


Mus musculus

Features
Gene ID: ENSMUSG00000024758
  
Biological name :Rtn3
  
Synonyms : Q9ES97 / Reticulon-3 / Rtn3
  
Possible biological names infered from orthology : O95197
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 7425901
Gene end: 7483289
  
Corresponding Affymetrix probe sets: 10465686 (MoGene1.0st)   1418101_a_at (Mouse Genome 430 2.0 Array)   1425539_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025667
Ensembl peptide - ENSMUSP00000065810
Ensembl peptide - ENSMUSP00000085494
Ensembl peptide - ENSMUSP00000085496
NCBI entrez gene - 20168     See in Manteia.
MGI - MGI:1339970
RefSeq - XM_017318088
RefSeq - NM_001003933
RefSeq - NM_001003934
RefSeq - NM_001271486
RefSeq - NM_001271487
RefSeq - NM_053076
RefSeq Peptide - NP_001003934
RefSeq Peptide - NP_001258415
RefSeq Peptide - NP_001258416
RefSeq Peptide - NP_444306
RefSeq Peptide - NP_001003933
swissprot - Q9ES97
Ensembl - ENSMUSG00000024758
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn3ENSDARG00000091348Danio rerio
 RTN3ENSG00000133318Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rtn4 / Q99P72 / reticulon 4 / Q9NQC3*ENSMUSG0000002045824
Rtn1 / Q8K0T0 / reticulon 1 / Q16799*ENSMUSG0000002108719
Rtn2 / O70622 / reticulon 2 (Z-band associated protein) / O75298* / reticulon 2*ENSMUSG0000003040112


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0071786 endoplasmic reticulum tubular network organization ISO
 biological_processGO:0071787 endoplasmic reticulum tubular network formation ISO
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISO
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Synaptic adhesion-like molecules


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000036957 Lrfn3 / Q8BLY3 / Leucine-rich repeat and fibronectin type-III domain-containing protein 3 / Q9BTN0* / leucine rich repeat and fibronectin type III domain containing 3*  / complex / reaction
 ENSMUSG00000040490 Lrfn2 / Q80TG9 / Leucine-rich repeat and fibronectin type-III domain-containing protein 2 / Q9ULH4* / leucine rich repeat and fibronectin type III domain containing 2*  / reaction / complex






 

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