ENSG00000133318


Homo sapiens

Features
Gene ID: ENSG00000133318
  
Biological name :RTN3
  
Synonyms : O95197 / reticulon 3 / RTN3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.1
Gene start: 63681446
Gene end: 63759891
  
Corresponding Affymetrix probe sets: 219549_s_at (Human Genome U133 Plus 2.0 Array)   224564_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000441614
Ensembl peptide - ENSP00000440960
Ensembl peptide - ENSP00000442080
Ensembl peptide - ENSP00000442733
Ensembl peptide - ENSP00000340903
Ensembl peptide - ENSP00000344106
Ensembl peptide - ENSP00000346492
Ensembl peptide - ENSP00000348279
Ensembl peptide - ENSP00000367050
Ensembl peptide - ENSP00000437971
Ensembl peptide - ENSP00000440874
NCBI entrez gene - 10313     See in Manteia.
OMIM - 604249
RefSeq - XM_011544731
RefSeq - NM_001265589
RefSeq - NM_001265590
RefSeq - NM_001265591
RefSeq - NM_006054
RefSeq - NM_201428
RefSeq - NM_201429
RefSeq - NM_201430
RefSeq - XM_011544730
RefSeq Peptide - NP_958833
RefSeq Peptide - NP_001252518
RefSeq Peptide - NP_001252519
RefSeq Peptide - NP_001252520
RefSeq Peptide - NP_006045
RefSeq Peptide - NP_958831
RefSeq Peptide - NP_958832
swissprot - O95197
swissprot - A0A024R5C4
swissprot - F5H617
swissprot - F5H891
swissprot - B7Z4M1
swissprot - F5GWG7
Ensembl - ENSG00000133318
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtn3ENSDARG00000091348Danio rerio
 Rtn3ENSMUSG00000024758Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RTN4 / Q9NQC3 / reticulon 4ENSG0000011531025
RTN1 / Q16799 / reticulon 1ENSG0000013997019
RTN2 / O75298 / reticulon 2ENSG0000012574413


Protein motifs (from Interpro)
Interpro ID Name
 IPR003388  Reticulon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0071786 endoplasmic reticulum tubular network organization IMP
 biological_processGO:0071787 endoplasmic reticulum tubular network formation IDA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005615 extracellular space TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Synaptic adhesion-like molecules


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000126243 LRFN3 / Q9BTN0 / leucine rich repeat and fibronectin type III domain containing 3  / reaction / complex
 ENSG00000156564 LRFN2 / Q9ULH4 / leucine rich repeat and fibronectin type III domain containing 2  / complex / reaction






 

1 s.

 
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contact: otassy@igbmc.fr