ENSG00000125970


Homo sapiens

Features
Gene ID: ENSG00000125970
  
Biological name :RALY
  
Synonyms : Q9UKM9 / RALY / RALY heterogeneous nuclear ribonucleoprotein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q11.22
Gene start: 33993646
Gene end: 34108308
  
Corresponding Affymetrix probe sets: 201271_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415973
Ensembl peptide - ENSP00000246194
Ensembl peptide - ENSP00000403744
Ensembl peptide - ENSP00000413638
Ensembl peptide - ENSP00000327522
Ensembl peptide - ENSP00000364255
NCBI entrez gene - 22913     See in Manteia.
OMIM - 614663
RefSeq - XM_017027731
RefSeq - NM_007367
RefSeq - NM_016732
RefSeq - XM_005260334
RefSeq - XM_005260336
RefSeq - XM_011528694
RefSeq - XM_011528695
RefSeq Peptide - NP_057951
RefSeq Peptide - NP_031393
swissprot - Q5QPM1
swissprot - Q5QPM2
swissprot - Q5QPL9
swissprot - Q5QPM0
swissprot - Q9UKM9
Ensembl - ENSG00000125970
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ralyENSDARG00000059972Danio rerio
 RALYENSGALG00000033696Gallus gallus
 RalyENSMUSG00000027593Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RALYL / Q86SE5 / RALY RNA binding protein likeENSG0000018467255
HNRNPC / P07910 / heterogeneous nuclear ribonucleoprotein C (C1/C2)ENSG0000009219947
O60812 / HNRNPCL1 / heterogeneous nuclear ribonucleoprotein C-like 1ENSG0000017917243
B2RXH8 / HNRNPCL2 / heterogeneous nuclear ribonucleoprotein C-like 2ENSG0000027577442
B7ZW38 / HNRNPCL3 / heterogeneous nuclear ribonucleoprotein C-like 3ENSG0000027705842
P0DMR1 / HNRNPCL4 / heterogeneous nuclear ribonucleoprotein C-like 4ENSG0000017941242


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR017347  Heterogeneous nuclear ribonucleoprotein C
 IPR034502  Raly, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IC
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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