ENSG00000179172


Homo sapiens

Features
Gene ID: ENSG00000179172
  
Biological name :HNRNPCL1
  
Synonyms : heterogeneous nuclear ribonucleoprotein C-like 1 / HNRNPCL1 / O60812
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.21
Gene start: 12847408
Gene end: 12848725
  
Corresponding Affymetrix probe sets: 216302_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000365370
NCBI entrez gene - 343069     See in Manteia.
RefSeq - NM_001013631
RefSeq Peptide - NP_001013653
swissprot - O60812
Ensembl - ENSG00000179172
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpcENSDARG00000053810Danio rerio
 zgc:55733ENSDARG00000103845Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B2RXH8 / HNRNPCL2 / heterogeneous nuclear ribonucleoprotein C-like 2ENSG0000027577496
P0DMR1 / HNRNPCL4 / heterogeneous nuclear ribonucleoprotein C-like 4ENSG0000017941294
B7ZW38 / HNRNPCL3 / heterogeneous nuclear ribonucleoprotein C-like 3ENSG0000027705894
HNRNPC / P07910 / heterogeneous nuclear ribonucleoprotein C (C1/C2)ENSG0000009219991
RALYL / Q86SE5 / RALY RNA binding protein likeENSG0000018467246
RALY / Q9UKM9 / RALY heterogeneous nuclear ribonucleoproteinENSG0000012597045


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR017347  Heterogeneous nuclear ribonucleoprotein C
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr