ENSG00000132639


Homo sapiens

Features
Gene ID: ENSG00000132639
  
Biological name :SNAP25
  
Synonyms : P60880 / SNAP25 / synaptosome associated protein 25
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p12.2
Gene start: 10218830
Gene end: 10307418
  
Corresponding Affymetrix probe sets: 1556629_a_at (Human Genome U133 Plus 2.0 Array)   202507_s_at (Human Genome U133 Plus 2.0 Array)   202508_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000254976
Ensembl peptide - ENSP00000307341
Ensembl peptide - ENSP00000400720
NCBI entrez gene - 6616     See in Manteia.
OMIM - 600322
RefSeq - NM_001322906
RefSeq - NM_001322907
RefSeq - NM_001322908
RefSeq - NM_001322909
RefSeq - NM_001322910
RefSeq - NM_003081
RefSeq - NM_130811
RefSeq - XM_017028023
RefSeq - NM_001322902
RefSeq - NM_001322903
RefSeq - NM_001322904
RefSeq - NM_001322905
RefSeq - XM_005260808
RefSeq - XM_017028021
RefSeq - XM_017028022
RefSeq Peptide - NP_001309833
RefSeq Peptide - NP_001309835
RefSeq Peptide - NP_001309836
RefSeq Peptide - NP_001309837
RefSeq Peptide - NP_001309838
RefSeq Peptide - NP_001309839
RefSeq Peptide - NP_003072
RefSeq Peptide - NP_570824
RefSeq Peptide - NP_001309832
RefSeq Peptide - NP_001309834
RefSeq Peptide - NP_001309831
swissprot - P60880
swissprot - A0A0A0MSS0
Ensembl - ENSG00000132639
  
Related genetic diseases (OMIM): 616330 - ?Myasthenic syndrome, congenital, 18, 616330
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5TZ66ENSDARG00000020609Danio rerio
 Q5TZ66ENSDARG00000058117Danio rerio
 P60878ENSGALG00000009003Gallus gallus
 P60879ENSMUSG00000027273Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O00161 / SNAP23 / synaptosome associated protein 23ENSG0000009253156


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR000928  SNAP-25


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001504 neurotransmitter uptake NAS
 biological_processGO:0007268 chemical synaptic transmission NAS
 biological_processGO:0007269 neurotransmitter secretion TAS
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0008306 associative learning IEA
 biological_processGO:0010975 regulation of neuron projection development IEA
 biological_processGO:0014047 glutamate secretion TAS
 biological_processGO:0016079 synaptic vesicle exocytosis TAS
 biological_processGO:0016081 synaptic vesicle docking NAS
 biological_processGO:0016082 synaptic vesicle priming IBA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0031915 positive regulation of synaptic plasticity IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0050796 regulation of insulin secretion TAS
 biological_processGO:0060291 long-term synaptic potentiation IEA
 biological_processGO:0070201 regulation of establishment of protein localization IEA
 biological_processGO:0098967 exocytic insertion of neurotransmitter receptor to postsynaptic membrane IEA
 biological_processGO:0099590 neurotransmitter receptor internalization IEA
 biological_processGO:1990926 short-term synaptic potentiation IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0008076 voltage-gated potassium channel complex ISS
 cellular_componentGO:0016020 membrane ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030426 growth cone ISS
 cellular_componentGO:0031083 BLOC-1 complex IDA
 cellular_componentGO:0031201 SNARE complex TAS
 cellular_componentGO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEA
 cellular_componentGO:0031982 vesicle IDA
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0036477 somatodendritic compartment IEA
 cellular_componentGO:0042734 presynaptic membrane TAS
 cellular_componentGO:0043005 neuron projection ISS
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0070032 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex IBA
 cellular_componentGO:0070821 tertiary granule membrane TAS
 cellular_componentGO:0098794 postsynapse IEA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017075 syntaxin-1 binding IPI
 molecular_functionGO:0048306 calcium-dependent protein binding ISS


Pathways (from Reactome)
Pathway description
Serotonin Neurotransmitter Release Cycle
Norepinephrine Neurotransmitter Release Cycle
Glutamate Neurotransmitter Release Cycle
Dopamine Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
Regulation of insulin secretion
Other interleukin signaling
Toxicity of botulinum toxin type A (BoNT/A)
Toxicity of botulinum toxin type C (BoNT/C)
Toxicity of botulinum toxin type E (BoNT/E)
Neutrophil degranulation
GABA synthesis, release, reuptake and degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002355 Difficulty walking 
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 HP:0002465 Poor speech 
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 HP:0003388 Easy fatigability 
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 HP:0003577 Onset at birth 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000106089 STX1A / Q16623 / syntaxin 1A  / complex
 ENSG00000220205 VAMP2 / P63027 / vesicle associated membrane protein 2  / complex






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr