ENSG00000132837


Homo sapiens

Features
Gene ID: ENSG00000132837
  
Biological name :DMGDH
  
Synonyms : dimethylglycine dehydrogenase / DMGDH / Q9UI17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q14.1
Gene start: 78997606
Gene end: 79236038
  
Corresponding Affymetrix probe sets: 1559631_at (Human Genome U133 Plus 2.0 Array)   231591_at (Human Genome U133 Plus 2.0 Array)   231790_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000427834
Ensembl peptide - ENSP00000430972
Ensembl peptide - ENSP00000430133
Ensembl peptide - ENSP00000428995
Ensembl peptide - ENSP00000428092
Ensembl peptide - ENSP00000255189
NCBI entrez gene - 29958     See in Manteia.
OMIM - 605849
RefSeq - XM_006714597
RefSeq - XM_011543355
RefSeq - XM_011543354
RefSeq - NM_013391
RefSeq Peptide - NP_037523
swissprot - Q8TCC6
swissprot - Q9UI17
swissprot - E5RK15
swissprot - E5RG50
swissprot - E5RGI4
Ensembl - ENSG00000132837
  
Related genetic diseases (OMIM): 605850 - Dimethylglycine dehydrogenase deficiency, 605850
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dmgdhENSDARG00000025703Danio rerio
 DMGDHENSGALG00000004491Gallus gallus
 DmgdhENSMUSG00000042102Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SARDH / Q9UL12 / sarcosine dehydrogenaseENSG0000012345333
PDPR / Q8NCN5 / pyruvate dehydrogenase phosphatase regulatory subunitENSG0000009085730
AMT / P48728 / aminomethyltransferaseENSG0000014502012


Protein motifs (from Interpro)
Interpro ID Name
 IPR006076  FAD dependent oxidoreductase
 IPR006222  Aminomethyltransferase, folate-binding domain
 IPR013977  Glycine cleavage T-protein, C-terminal barrel domain
 IPR029043  Glycine cleavage T-protein/YgfZ, C-terminal
 IPR032503  FAD dependent oxidoreductase, central domain
 IPR036188  FAD/NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006579 amino-acid betaine catabolic process IEA
 biological_processGO:0019695 choline metabolic process NAS
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0042426 choline catabolic process IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0009055 electron transfer activity NAS
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0047865 dimethylglycine dehydrogenase activity TAS


Pathways (from Reactome)
Pathway description
Choline catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0003236 Elevated serum creatine phosphokinase 
Show

 HP:0003750 Muscle fatigue "An abnormal, increased fatigability of the musculature." [HPO:curators]
Show

 HP:0012379 Abnormal enzyme/coenzyme activity "An altered ability of any enzyme or their cofactors to act as catalysts." [HPO:probinson, MP:0005584]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr