ENSG00000133687


Homo sapiens

Features
Gene ID: ENSG00000133687
  
Biological name :TMTC1
  
Synonyms : Q8IUR5 / TMTC1 / transmembrane and tetratricopeptide repeat containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p11.22
Gene start: 29500840
Gene end: 29784759
  
Corresponding Affymetrix probe sets: 224397_s_at (Human Genome U133 Plus 2.0 Array)   226322_at (Human Genome U133 Plus 2.0 Array)   226931_at (Human Genome U133 Plus 2.0 Array)   244506_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000442046
Ensembl peptide - ENSP00000449043
Ensembl peptide - ENSP00000449054
Ensembl peptide - ENSP00000256062
Ensembl peptide - ENSP00000448112
NCBI entrez gene - 83857     See in Manteia.
OMIM - 615855
RefSeq - XM_017020007
RefSeq - NM_175861
RefSeq - XM_005253499
RefSeq - XM_017020003
RefSeq - XM_017020004
RefSeq - XM_017020005
RefSeq - XM_017020006
RefSeq - NM_001193451
RefSeq Peptide - NP_001180380
RefSeq Peptide - NP_787057
swissprot - F8VXU8
swissprot - H0YIB9
swissprot - Q8IUR5
swissprot - F8VTQ9
Ensembl - ENSG00000133687
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmtc1ENSDARG00000063149Danio rerio
 TMTC1ENSGALG00000012956Gallus gallus
 Tmtc1ENSMUSG00000030306Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMTC2 / Q8N394 / transmembrane and tetratricopeptide repeat containing 2ENSG0000017910430
TMTC3 / Q6ZXV5 / transmembrane and tetratricopeptide repeat containing 3ENSG0000013932427
TMTC4 / Q5T4D3 / transmembrane and tetratricopeptide repeat containing 4ENSG0000012524727
OGT / O15294 / O-linked N-acetylglucosamine (GlcNAc) transferaseENSG0000014716215


Protein motifs (from Interpro)
Interpro ID Name
 IPR003107  HAT (Half-A-TPR) repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013105  Tetratricopeptide repeat 2
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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