ENSG00000179104


Homo sapiens

Features
Gene ID: ENSG00000179104
  
Biological name :TMTC2
  
Synonyms : Q8N394 / TMTC2 / transmembrane and tetratricopeptide repeat containing 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q21.31
Gene start: 82686880
Gene end: 83134870
  
Corresponding Affymetrix probe sets: 228574_at (Human Genome U133 Plus 2.0 Array)   235775_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000448630
Ensembl peptide - ENSP00000322300
Ensembl peptide - ENSP00000447609
Ensembl peptide - ENSP00000448292
NCBI entrez gene - 160335     See in Manteia.
OMIM - 615856
RefSeq - XM_017018884
RefSeq - NM_001320321
RefSeq - NM_001320322
RefSeq - NM_152588
RefSeq Peptide - NP_001307251
RefSeq Peptide - NP_001307250
RefSeq Peptide - NP_689801
swissprot - Q8N394
swissprot - F8VRQ2
swissprot - A0A0B4J253
swissprot - F8VSH2
Ensembl - ENSG00000179104
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmtc2aENSDARG00000045753Danio rerio
 tmtc2bENSDARG00000035273Danio rerio
 TMTC2ENSGALG00000010975Gallus gallus
 Tmtc2ENSMUSG00000036019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMTC1 / Q8IUR5 / transmembrane and tetratricopeptide repeat containing 1ENSG0000013368731
TMTC4 / Q5T4D3 / transmembrane and tetratricopeptide repeat containing 4ENSG0000012524729
TMTC3 / Q6ZXV5 / transmembrane and tetratricopeptide repeat containing 3ENSG0000013932429
OGT / O15294 / O-linked N-acetylglucosamine (GlcNAc) transferaseENSG0000014716213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055074 calcium ion homeostasis IMP
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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