ENSG00000125247


Homo sapiens

Features
Gene ID: ENSG00000125247
  
Biological name :TMTC4
  
Synonyms : Q5T4D3 / TMTC4 / transmembrane and tetratricopeptide repeat containing 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q32.3
Gene start: 100603927
Gene end: 100675093
  
Corresponding Affymetrix probe sets: 1554101_a_at (Human Genome U133 Plus 2.0 Array)   1554102_a_at (Human Genome U133 Plus 2.0 Array)   225666_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000365408
Ensembl peptide - ENSP00000398400
Ensembl peptide - ENSP00000343871
Ensembl peptide - ENSP00000419613
Ensembl peptide - ENSP00000365409
Ensembl peptide - ENSP00000393600
NCBI entrez gene - 84899     See in Manteia.
RefSeq - XM_017020799
RefSeq - NM_032813
RefSeq - XM_011521121
RefSeq - XM_011521122
RefSeq - XM_011521123
RefSeq - XM_011521124
RefSeq - XM_011521125
RefSeq - XM_017020796
RefSeq - XM_017020797
RefSeq - XM_017020798
RefSeq - NM_001079669
RefSeq - NM_001286453
RefSeq - NM_001350577
RefSeq Peptide - NP_001073137
RefSeq Peptide - NP_001273382
RefSeq Peptide - NP_001337501
RefSeq Peptide - NP_001337506
RefSeq Peptide - NP_116202
swissprot - C9K0R2
swissprot - Q5T4D3
swissprot - X6RF05
swissprot - H7C095
Ensembl - ENSG00000125247
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmtc4ENSDARG00000020447Danio rerio
 TMTC4ENSGALG00000016870Gallus gallus
 Tmtc4ENSMUSG00000041594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMTC3 / Q6ZXV5 / transmembrane and tetratricopeptide repeat containing 3ENSG0000013932433
TMTC2 / Q8N394 / transmembrane and tetratricopeptide repeat containing 2ENSG0000017910432
TMTC1 / Q8IUR5 / transmembrane and tetratricopeptide repeat containing 1ENSG0000013368732
OGT / O15294 / O-linked N-acetylglucosamine (GlcNAc) transferaseENSG0000014716216


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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