ENSG00000143006


Homo sapiens

Features
Gene ID: ENSG00000143006
  
Biological name :DMRTB1
  
Synonyms : DMRTB1 / DMRT like family B with proline rich C-terminal 1 / Q96MA1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p32.3
Gene start: 53459399
Gene end: 53467488
  
Corresponding Affymetrix probe sets: 240313_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000360500
NCBI entrez gene - 63948     See in Manteia.
OMIM - 614805
RefSeq - NM_033067
RefSeq Peptide - NP_149056
swissprot - Q96MA1
Ensembl - ENSG00000143006
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DMRTB1ENSGALG00000029023Gallus gallus
 A2A9I7ENSMUSG00000028610Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DMRTA2 / Q96SC8 / DMRT like family A2ENSG0000014270027
DMRTA1 / Q5VZB9 / DMRT like family A1ENSG0000017639921
DMRT3 / Q9NQL9 / doublesex and mab-3 related transcription factor 3ENSG0000006421821
DMRT2 / Q9Y5R5 / doublesex and mab-3 related transcription factor 2ENSG0000017325320
DMRT1 / Q9Y5R6 / doublesex and mab-3 related transcription factor 1ENSG0000013709018
DMRTC2 / Q8IXT2 / DMRT like family C2ENSG0000014202517
Q5HYR2 / DMRTC1B / DMRT like family C1BENSG000001849118
DMRTC1 / Q5HYR2 / DMRT like family C1ENSG000002695028


Protein motifs (from Interpro)
Interpro ID Name
 IPR001275  DM DNA-binding domain
 IPR026607  DMRT/protein doublesex/protein male abnormal 3
 IPR036407  DM DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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