ENSG00000147206


Homo sapiens

Features
Gene ID: ENSG00000147206
  
Biological name :NXF3
  
Synonyms : nuclear RNA export factor 3 / NXF3 / Q9H4D5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q22.1
Gene start: 103075810
Gene end: 103093125
  
Corresponding Affymetrix probe sets: 220110_s_at (Human Genome U133 Plus 2.0 Array)   222949_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000378504
Ensembl peptide - ENSP00000404017
NCBI entrez gene - 56000     See in Manteia.
OMIM - 300316
RefSeq - NM_022052
RefSeq Peptide - NP_071335
swissprot - Q9H4D5
swissprot - H0Y6A1
Ensembl - ENSG00000147206
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nxf1ENSDARG00000055076Danio rerio
 zgc:153681ENSDARG00000086017Danio rerio
 Nxf3ENSMUSG00000057000Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NXF2B / Q9GZY0 / nuclear RNA export factor 2BENSG0000026943753
NXF2 / Q9GZY0 / nuclear RNA export factor 2ENSG0000026940553
NXF1 / Q9UBU9 / nuclear RNA export factor 1ENSG0000016223151
NXF5 / Q9H1B4 / nuclear RNA export factor 5ENSG0000012695230


Protein motifs (from Interpro)
Interpro ID Name
 IPR002075  Nuclear transport factor 2
 IPR015245  Nuclear RNA export factor Tap, RNA-binding domain
 IPR018222  Nuclear transport factor 2, eukaryote
 IPR030216  Nuclear RNA export factor 3
 IPR030217  Nuclear RNA export factor
 IPR032675  Leucine-rich repeat domain superfamily
 IPR032710  NTF2-like domain superfamily
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IBA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0042272 nuclear RNA export factor complex IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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