ENSG00000126952


Homo sapiens

Features
Gene ID: ENSG00000126952
  
Biological name :NXF5
  
Synonyms : nuclear RNA export factor 5 / NXF5 / Q9H1B4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q22.1
Gene start: 101832112
Gene end: 101857577
  
Corresponding Affymetrix probe sets: 234648_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000426978
Ensembl peptide - ENSP00000442401
Ensembl peptide - ENSP00000263032
Ensembl peptide - ENSP00000331535
Ensembl peptide - ENSP00000354539
Ensembl peptide - ENSP00000361889
Ensembl peptide - ENSP00000422976
NCBI entrez gene - 55998     See in Manteia.
OMIM - 300319
RefSeq - NM_032946
RefSeq Peptide - NP_116564
swissprot - Q9H1B4
Ensembl - ENSG00000126952
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nxf1ENSDARG00000055076Danio rerio
 zgc:153681ENSDARG00000086017Danio rerio
 Nxf2ENSMUSG00000009941Mus musculus
 Nxf7ENSMUSG00000031410Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NXF2B / Q9GZY0 / nuclear RNA export factor 2BENSG0000026943787
NXF2 / Q9GZY0 / nuclear RNA export factor 2ENSG0000026940587
NXF1 / Q9UBU9 / nuclear RNA export factor 1ENSG0000016223157
NXF3 / Q9H4D5 / nuclear RNA export factor 3ENSG0000014720644


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR015245  Nuclear RNA export factor Tap, RNA-binding domain
 IPR030217  Nuclear RNA export factor
 IPR032675  Leucine-rich repeat domain superfamily
 IPR032710  NTF2-like domain superfamily
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IDA
 biological_processGO:0007275 multicellular organism development IEP
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IBA
 biological_processGO:0050658 RNA transport IDA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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