ENSG00000155380


Homo sapiens

Features
Gene ID: ENSG00000155380
  
Biological name :SLC16A1
  
Synonyms : P53985 / SLC16A1 / solute carrier family 16 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.2
Gene start: 112911847
Gene end: 112957013
  
Corresponding Affymetrix probe sets: 1557918_s_at (Human Genome U133 Plus 2.0 Array)   202234_s_at (Human Genome U133 Plus 2.0 Array)   202235_at (Human Genome U133 Plus 2.0 Array)   202236_s_at (Human Genome U133 Plus 2.0 Array)   209900_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358640
Ensembl peptide - ENSP00000399104
Ensembl peptide - ENSP00000416167
Ensembl peptide - ENSP00000441065
Ensembl peptide - ENSP00000397106
NCBI entrez gene - 6566     See in Manteia.
OMIM - 600682
RefSeq - XM_011542027
RefSeq - NM_001166496
RefSeq - NM_003051
RefSeq - XM_011542026
RefSeq Peptide - NP_003042
RefSeq Peptide - NP_001159968
swissprot - Q5T8R3
swissprot - Q5T8R5
swissprot - A0A024R0H1
swissprot - Q5T8R4
swissprot - P53985
Ensembl - ENSG00000155380
  
Related genetic diseases (OMIM): 245340 - Erythrocyte lactate transporter defect, 245340
  610021 - Hyperinsulinemic hypoglycemia, familial, 7, 610021
  616095 - Monocarboxylate transporter 1 deficiency, 616095
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc16a1aENSDARG00000016963Danio rerio
 slc16a1bENSDARG00000068572Danio rerio
 SLC16A1ENSGALG00000001717Gallus gallus
 P53986ENSMUSG00000032902Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O60669 / SLC16A7 / solute carrier family 16 member 7ENSG0000011859658
O15427 / SLC16A3 / solute carrier family 16 member 3ENSG0000014152640
O95907 / SLC16A8 / solute carrier family 16 member 8ENSG0000010015637
O15403 / SLC16A6 / solute carrier family 16 member 6ENSG0000010893228
SLC16A12 / solute carrier family 16 member 12ENSG0000015277928
O15375 / SLC16A5 / solute carrier family 16 member 5ENSG0000017019026
Q7RTY0 / SLC16A13 / solute carrier family 16 member 13ENSG0000017432726
Q8NCK7 / SLC16A11 / solute carrier family 16 member 11ENSG0000017432625


Protein motifs (from Interpro)
Interpro ID Name
 IPR004743  Monocarboxylate transporter
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain
 IPR030757  Monocarboxylate transporter 1
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006090 pyruvate metabolic process TAS
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007098 centrosome cycle IMP
 biological_processGO:0015718 monocarboxylic acid transport TAS
 biological_processGO:0015728 mevalonate transport TAS
 biological_processGO:0032094 response to food IEA
 biological_processGO:0035873 lactate transmembrane transport IEA
 biological_processGO:0035879 plasma membrane lactate transport ISS
 biological_processGO:0042593 glucose homeostasis IEA
 biological_processGO:0050796 regulation of insulin secretion IEA
 biological_processGO:0050900 leukocyte migration TAS
 biological_processGO:0051780 behavioral response to nutrient IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071407 cellular response to organic cyclic compound IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0030054 cell junction IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0008028 monocarboxylic acid transmembrane transporter activity TAS
 molecular_functionGO:0015129 lactate transmembrane transporter activity EXP
 molecular_functionGO:0015130 mevalonate transmembrane transporter activity TAS
 molecular_functionGO:0015293 symporter activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0097159 organic cyclic compound binding IEA


Pathways (from Reactome)
Pathway description
Basigin interactions
Proton-coupled monocarboxylate transport
Defective SLC16A1 causes symptomatic deficiency in lactate transport (SDLT)
Pyruvate metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000825 Hyperinsulinemic hypoglycemia 
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001325 Hypoglycemic coma 
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 HP:0001425 Heterogeneous 
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 HP:0001993 Ketoacidosis 
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 HP:0002173 Seizures, hypoglycemic 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003710 Muscle cramps with exercise 
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 HP:0004510 Islets of Langerhans hyperplasia 
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 HP:0008967 Exercise-induced muscle stiffness 
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 HP:0009020 Exercise-induced muscle fatigue "An abnormally increased tendency towards muscle fatigue induced by physical exercise." [HPO:curators]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012734 Ketotic hypoglycemia "Low blood glucose is accompanied by elevated levels of ketone bodies in the body." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000172270 BSG / P35613 / basigin (Ok blood group)  / reaction / complex
 ENSG00000155380 P53985 / SLC16A1 / solute carrier family 16 member 1  / reaction / complex
 ENSG00000141526 O15427 / SLC16A3 / solute carrier family 16 member 3  / reaction
 ENSG00000100156 O95907 / SLC16A8 / solute carrier family 16 member 8  / reaction






 

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