ENSG00000163687


Homo sapiens

Features
Gene ID: ENSG00000163687
  
Biological name :DNASE1L3
  
Synonyms : deoxyribonuclease 1 like 3 / DNASE1L3 / Q13609
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p14.3
Gene start: 58192257
Gene end: 58214697
  
Corresponding Affymetrix probe sets: 1561336_at (Human Genome U133 Plus 2.0 Array)   205554_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000378053
Ensembl peptide - ENSP00000419052
Ensembl peptide - ENSP00000418509
Ensembl peptide - ENSP00000418113
Ensembl peptide - ENSP00000417976
Ensembl peptide - ENSP00000417047
NCBI entrez gene - 1776     See in Manteia.
OMIM - 602244
RefSeq - NM_001256560
RefSeq - NM_004944
RefSeq Peptide - NP_001243489
RefSeq Peptide - NP_004935
swissprot - C9J9N0
swissprot - Q13609
swissprot - C9J0L2
swissprot - A0A0A0MT68
swissprot - A0A024R365
swissprot - H7C4R7
Ensembl - ENSG00000163687
  
Related genetic diseases (OMIM): 614420 - Systemic lupus erythematosus 16, 614420
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DNASE1L3ENSGALG00000005688Gallus gallus
 O55070ENSMUSG00000025279Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q92874 / DNASE1L2 / deoxyribonuclease 1 like 2ENSG0000016796842
DNASE1 / P24855 / deoxyribonuclease 1ENSG0000021391841
P49184 / DNASE1L1 / deoxyribonuclease 1 like 1ENSG0000001356338


Protein motifs (from Interpro)
Interpro ID Name
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR016202  Deoxyribonuclease I
 IPR018057  Deoxyribonuclease I, active site
 IPR033125  Deoxyribonuclease I, conservied site
 IPR036691  Endonuclease/exonuclease/phosphatase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000737 DNA catabolic process, endonucleolytic IEA
 biological_processGO:0002283 neutrophil activation involved in immune response ISS
 biological_processGO:0002673 regulation of acute inflammatory response ISS
 biological_processGO:0006259 DNA metabolic process TAS
 biological_processGO:0006308 DNA catabolic process IEA
 biological_processGO:0006309 apoptotic DNA fragmentation IDA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010623 programmed cell death involved in cell development IEA
 biological_processGO:0012501 programmed cell death IEA
 biological_processGO:0070948 regulation of neutrophil mediated cytotoxicity ISS
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004520 endodeoxyribonuclease activity IEA
 molecular_functionGO:0004536 deoxyribonuclease activity IEA
 molecular_functionGO:0005509 calcium ion binding TAS
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000083 Renal failure 
Show

 HP:0000093 Proteinuria 
Show

 HP:0000123 Nephritis "The presence of inflammation affecting the kidney." [HPO:curators]
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
Show

 HP:0000554 Uveitis "Inflammation of one or all portions of the uveal tract." [HPO:curators]
Show

 HP:0000763 Sensory neuropathy "Peripheral neuropathy affecting primarily the sensory nerves." [HPO:curators]
Show

 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
Show

 HP:0000988 Skin rash 
Show

 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001287 Meningitis 
Show

 HP:0001315 Reduced reflexes 
Show

 HP:0001369 Arthritis 
Show

 HP:0001373 Joint dislocation "Displacement or malalignment of joints." [HPO:curators]
Show

 HP:0001541 Ascites 
Show

 HP:0001654 Abnormality of the heart valves "An abnormality of a `Cardiac valve` (FMA:7110)." [HPO:probinson]
Show

 HP:0001698 Pericardial effusion 
Show

 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
Show

 HP:0002014 Diarrhea 
Show

 HP:0002017 Nausea and vomiting 
Show

 HP:0002027 Abdominal pain 
Show

 HP:0002091 Restrictive lung disease 
Show

 HP:0002094 Dyspnea 
Show

 HP:0002097 Emphysema 
Show

 HP:0002105 Hemoptysis "Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs." [HPO:curators]
Show

 HP:0002202 Pleural effusion "The presence of an excessive amount of fluid in the pleural cavity." [HPO:curators]
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0002665 Lymphoma "A cancer originating in lymphocytes and presenting as a solid tumor of lymhpoid cells." [HPO:curators]
Show

 HP:0002716 Lymphadenopathy 
Show

 HP:0002718 Recurrent bacterial infections 
Show

 HP:0002725 Systemic lupus erythematosus 
Show

 HP:0002960 Autoimmune disease 
Show

 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
Show

 HP:0004374 Hemiplegia/hemiparesis "Loss of strength in the arm, leg, and sometimes face on one side of the body. Hemiplegia refers to a severe or complete loss of strength, whereas hemiparesis refers to a relatively mild loss of strength." [HPO:curators]
Show

 HP:0004431 Complement deficiency 
Show

 HP:0006536 Obstructive lung disease 
Show

 HP:0006824 Cranial nerve paralysis 
Show

 HP:0007400 Irregular hyperpigmentation 
Show

 HP:0011944 Small vessel vasculitis "A type of vasculitis (inflammation of blood vessel walls) that affects blood vessels that are smaller than arteries, i.e., arterioles, venules, and capilllaries." [HPO:probinson, pmid:9366584]
Show

 HP:0012735 Cough "A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation." [HPO:probinson]
Show

 HP:0100021 Cerebral paralysis "Cerebral palsy describes a group of permanent disorders of the development of movement and posture, causing activity limitation, that are attributed to nonprogressive disturbances that occurred in the developing fetal or infant brain. The motor disorders of cerebral palsy are often accompanied by disturbances of sensation, perception, cognition, communication, and behaviour, by epilepsy, and by secondary musculoskeletal problems." [HPO:sdoelken]
Show

 HP:0100326 Immunologic hypersensitivity 
Show

 HP:0100534 Episcleritis 
Show

 HP:0100665 Angioedema "Rapid swelling (edema) of the dermis, subcutaneous tissue, mucosa and submucosal tissues of the skin of the face, normally around the mouth, and the mucosa of the mouth and/or throat, as well as the tongue during a period of minutes to several hours. The swelling can also occur elsewhere, typically in the hands." [HPO:sdoelken]
Show

 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr