ENSG00000167434


Homo sapiens

Features
Gene ID: ENSG00000167434
  
Biological name :CA4
  
Synonyms : CA4 / carbonic anhydrase 4 / P22748
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q23.1
Gene start: 60149936
Gene end: 60170899
  
Corresponding Affymetrix probe sets: 206208_at (Human Genome U133 Plus 2.0 Array)   206209_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000464757
Ensembl peptide - ENSP00000466964
Ensembl peptide - ENSP00000467465
Ensembl peptide - ENSP00000300900
Ensembl peptide - ENSP00000465837
NCBI entrez gene - 762     See in Manteia.
OMIM - 114760
RefSeq - XM_017025012
RefSeq - NM_000717
RefSeq - XM_005257639
RefSeq - XM_011525183
RefSeq Peptide - NP_000708
swissprot - P22748
swissprot - K7EKY5
swissprot - K7ENI8
swissprot - K7EIH9
Ensembl - ENSG00000167434
  
Related genetic diseases (OMIM): 600852 - Retinitis pigmentosa 17, 600852
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ca15aENSDARG00000015654Danio rerio
 ca15bENSDARG00000040510Danio rerio
 ca15cENSDARG00000002259Danio rerio
 CA4 (1 of many)ENSDARG00000087756Danio rerio
 zgc:153760ENSDARG00000074666Danio rerio
 CA4ENSGALG00000005360Gallus gallus
 Car4ENSMUSG00000000805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CA14 / Q9ULX7 / carbonic anhydrase 14ENSG0000011829831
CA12 / O43570 / carbonic anhydrase 12ENSG0000007441031
CA6 / P23280 / carbonic anhydrase 6ENSG0000013168629
CA2 / P00918 / carbonic anhydrase 2ENSG0000010426729
CA7 / P43166 / carbonic anhydrase 7ENSG0000016874828
CA9 / Q16790 / carbonic anhydrase 9ENSG0000010715928
CA5A / P35218 / carbonic anhydrase 5AENSG0000017499028
CA13 / Q8N1Q1 / carbonic anhydrase 13ENSG0000018501528
CA5B / Q9Y2D0 / carbonic anhydrase 5BENSG0000016923927
CA8 / P35219 / carbonic anhydrase 8ENSG0000017853826
CA1 / P00915 / carbonic anhydrase 1ENSG0000013374225
CA3 / P07451 / carbonic anhydrase 3ENSG0000016487925


Protein motifs (from Interpro)
Interpro ID Name
 IPR001148  Alpha carbonic anhydrase domain
 IPR018338  Carbonic anhydrase, alpha-class, conserved site
 IPR018343  Carbonic anhydrase, CA4
 IPR023561  Carbonic anhydrase, alpha-class
 IPR036398  Alpha carbonic anhydrase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006730 one-carbon metabolic process IEA
 biological_processGO:0015701 bicarbonate transport IMP
 cellular_componentGO:0005791 rough endoplasmic reticulum IDA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0030658 transport vesicle membrane IDA
 cellular_componentGO:0030667 secretory granule membrane IDA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0031362 anchored component of external side of plasma membrane IDA
 cellular_componentGO:0031526 brush border membrane IDA
 cellular_componentGO:0046658 anchored component of plasma membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 cellular_componentGO:0070062 extracellular exosome IDA
 molecular_functionGO:0004089 carbonate dehydratase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Erythrocytes take up carbon dioxide and release oxygen
Erythrocytes take up oxygen and release carbon dioxide
Reversible hydration of carbon dioxide


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000987 Scarring 
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 HP:0001249 Mental retardation 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008736 Hypoplasia of penis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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