ENSG00000169884


Homo sapiens

Features
Gene ID: ENSG00000169884
  
Biological name :WNT10B
  
Synonyms : O00744 / WNT10B / Wnt family member 10B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.12
Gene start: 48965340
Gene end: 48971763
  
Corresponding Affymetrix probe sets: 206213_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000384691
Ensembl peptide - ENSP00000404896
Ensembl peptide - ENSP00000398473
Ensembl peptide - ENSP00000385980
Ensembl peptide - ENSP00000301061
NCBI entrez gene - 7480     See in Manteia.
OMIM - 601906
RefSeq - NM_003394
RefSeq - XM_011538724
RefSeq Peptide - NP_003385
swissprot - B5MCC8
swissprot - C9JCI2
swissprot - O00744
swissprot - C9J3H3
Ensembl - ENSG00000169884
  
Related genetic diseases (OMIM): 225300 - Split-hand/foot malformation 6, 225300
  617073 - Tooth agenesis, selective, 8, 617073
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wnt10bENSDARG00000040925Danio rerio
 P48614ENSMUSG00000022996Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9GZT5 / WNT10A / Wnt family member 10AENSG0000013592562
WNT9B / O14905 / Wnt family member 9BENSG0000015895533
WNT9A / O14904 / Wnt family member 9AENSG0000014381632
WNT8B / Q93098 / Wnt family member 8BENSG0000007529030
WNT8A / Q9H1J5 / Wnt family member 8AENSG0000006149228


Protein motifs (from Interpro)
Interpro ID Name
 IPR005817  Wnt
 IPR013302  Wnt-10 protein
 IPR018161  Wnt protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000086 G2/M transition of mitotic cell cycle IEA
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0002062 chondrocyte differentiation IEP
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007050 cell cycle arrest IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEA
 biological_processGO:0014835 myoblast differentiation involved in skeletal muscle regeneration IEA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0030182 neuron differentiation ISS
 biological_processGO:0030501 positive regulation of bone mineralization IEA
 biological_processGO:0030858 positive regulation of epithelial cell differentiation IEA
 biological_processGO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0043403 skeletal muscle tissue regeneration IEA
 biological_processGO:0045165 cell fate commitment IBA
 biological_processGO:0045598 regulation of fat cell differentiation IEA
 biological_processGO:0045599 negative regulation of fat cell differentiation IDA
 biological_processGO:0045669 positive regulation of osteoblast differentiation IEA
 biological_processGO:0045778 positive regulation of ossification IEA
 biological_processGO:0045899 positive regulation of RNA polymerase II transcriptional preinitiation complex assembly IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048641 regulation of skeletal muscle tissue development IEA
 biological_processGO:0048741 skeletal muscle fiber development IEA
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IEA
 biological_processGO:0050821 protein stabilization IDA
 biological_processGO:0050909 sensory perception of taste IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0051246 regulation of protein metabolic process IEA
 biological_processGO:0051885 positive regulation of timing of anagen IEA
 biological_processGO:0060070 canonical Wnt signaling pathway IDA
 biological_processGO:0060346 bone trabecula formation IEA
 biological_processGO:0061196 fungiform papilla development IEA
 biological_processGO:0071300 cellular response to retinoic acid ISS
 biological_processGO:0071310 cellular response to organic substance IEA
 biological_processGO:0071320 cellular response to cAMP IEA
 biological_processGO:0071374 cellular response to parathyroid hormone stimulus IEA
 biological_processGO:0071407 cellular response to organic cyclic compound IEA
 biological_processGO:0071425 hematopoietic stem cell proliferation IDA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005109 frizzled binding IBA
 molecular_functionGO:0048018 receptor ligand activity IC


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking
Class B/2 (Secretin family receptors)
Transcriptional regulation of white adipocyte differentiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000526 Aniridia "Congenital absence of the iris." [HPO:curators]
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 HP:0000677 Oligodontia "The condition of missing over 6 teeth (Missing up to 6 teeth is referred to a hypodontia)." [HPO:curators]
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 HP:0000691 Microdontia 
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 HP:0000958 Dry skin 
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001180 Oligodactyly (hands) "A developmental defect resulting in the presence of fewer than the normal number of fingers." [HPO:curators]
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 HP:0001770 Toe syndactyly "Webbing or fusion of the toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001839 Ectrodactyly (feet) "A condition in which the middle toe is missing, and the foot is cleft where the metatarsal corresponding to the toe would normally be." [HPO:curators]
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 HP:0001849 Oligodactyly (feet) "A developmental defect resulting in the presence of fewer than the normal number of toes." [HPO:curators]
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 HP:0003829 Incomplete penetrance 
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 HP:0004050 Absent hands 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0008070 Sparse hair 
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 HP:0012165 Oligodactyly "A developmental defect resulting in the presence of fewer than the normal number of digits." [HPO:probinson]
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 HP:0045075 Sparse eyebrow "Decreased density/number of eyebrow hairs." [HPO:skoehler]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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