ENSG00000170423


Homo sapiens

Features
Gene ID: ENSG00000170423
  
Biological name :KRT78
  
Synonyms : keratin 78 / KRT78 / Q8N1N4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 52837804
Gene end: 52849092
  
Corresponding Affymetrix probe sets: 1553212_at (Human Genome U133 Plus 2.0 Array)   1553213_a_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000306261
Ensembl peptide - ENSP00000352479
Ensembl peptide - ENSP00000448562
NCBI entrez gene - 196374     See in Manteia.
OMIM - 611159
RefSeq - XM_011538010
RefSeq - NM_001300814
RefSeq - NM_173352
RefSeq Peptide - NP_001287743
RefSeq Peptide - NP_775487
swissprot - Q8N1N4
swissprot - H0YI54
Ensembl - ENSG00000170423
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000041671Gallus gallus
 Krt78ENSMUSG00000050463Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT73 / Q86Y46 / keratin 73ENSG0000018604950
KRT74 / Q7RTS7 / keratin 74ENSG0000017048448
KRT77 / Q7Z794 / keratin 77ENSG0000018918248
KRT2 / P35908 / keratin 2ENSG0000017286747
KRT72 / Q14CN4 / keratin 72ENSG0000017048647
KRT84 / Q9NSB2 / keratin 84ENSG0000016184943
KRT82 / Q9NSB4 / keratin 82ENSG0000016185042
KRT85 / P78386 / keratin 85ENSG0000013544341
KRT83 / P78385 / keratin 83ENSG0000017052339
KRT81 / Q14533 / keratin 81ENSG0000020542639
KRT86 / O43790 / keratin 86ENSG0000017044239
KRT80 / Q6KB66 / keratin 80ENSG0000016776732


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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