ENSG00000173930


Homo sapiens

Features
Gene ID: ENSG00000173930
  
Biological name :SLCO4C1
  
Synonyms : Q6ZQN7 / SLCO4C1 / solute carrier organic anion transporter family member 4C1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q21.1
Gene start: 102233986
Gene end: 102296549
  
Corresponding Affymetrix probe sets: 207596_at (Human Genome U133 Plus 2.0 Array)   222071_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000309741
NCBI entrez gene - 353189     See in Manteia.
OMIM - 609013
RefSeq - XM_011543372
RefSeq - NM_180991
RefSeq - XM_011543370
RefSeq Peptide - NP_851322
swissprot - Q6ZQN7
Ensembl - ENSG00000173930
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLCO4C1ENSGALG00000026768Gallus gallus
 Q8BGD4ENSMUSG00000040693Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96BD0 / SLCO4A1 / solute carrier organic anion transporter family member 4A1ENSG0000010118739
Q86UG4 / SLCO6A1 / solute carrier organic anion transporter family member 6A1ENSG0000020535935
Q9H2Y9 / SLCO5A1 / solute carrier organic anion transporter family member 5A1ENSG0000013757133
Q9UIG8 / SLCO3A1 / solute carrier organic anion transporter family member 3A1ENSG0000017646329
AC011604.2ENSG0000025704627
Q9NPD5 / SLCO1B3 / solute carrier organic anion transporter family member 1B3ENSG0000011170027
Q9Y6L6 / SLCO1B1 / solute carrier organic anion transporter family member 1B1ENSG0000013453827
O94956 / SLCO2B1 / solute carrier organic anion transporter family member 2B1ENSG0000013749126
Q9NYB5 / SLCO1C1 / solute carrier organic anion transporter family member 1C1ENSG0000013915525
Q92959 / SLCO2A1 / solute carrier organic anion transporter family member 2A1ENSG0000017464025
P46721 / SLCO1A2 / solute carrier organic anion transporter family member 1A2ENSG0000008445324
G3V0H7 / SLCO1B7 / solute carrier organic anion transporter family member 1B7 (putative)ENSG0000020575424


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR036058  Kazal domain superfamily
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043252 sodium-independent organic anion transport TAS
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0035577 azurophil granule membrane TAS
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity TAS


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Transport of organic anions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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