ENSG00000139155


Homo sapiens

Features
Gene ID: ENSG00000139155
  
Biological name :SLCO1C1
  
Synonyms : Q9NYB5 / SLCO1C1 / solute carrier organic anion transporter family member 1C1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p12.2
Gene start: 20695355
Gene end: 20753386
  
Corresponding Affymetrix probe sets: 220460_at (Human Genome U133 Plus 2.0 Array)   241951_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000437399
Ensembl peptide - ENSP00000444149
Ensembl peptide - ENSP00000444527
Ensembl peptide - ENSP00000266509
Ensembl peptide - ENSP00000438665
NCBI entrez gene - 53919     See in Manteia.
OMIM - 613389
RefSeq - XM_017019490
RefSeq - NM_001145944
RefSeq - NM_001145945
RefSeq - NM_001145946
RefSeq - NM_017435
RefSeq - XM_017019484
RefSeq - XM_017019485
RefSeq - XM_017019486
RefSeq - XM_017019487
RefSeq - XM_017019488
RefSeq - XM_017019489
RefSeq - XM_005253394
RefSeq - XM_005253396
RefSeq - XM_011520703
RefSeq - XM_011520704
RefSeq - XM_011520709
RefSeq - XM_011520711
RefSeq Peptide - NP_001139416
RefSeq Peptide - NP_001139417
RefSeq Peptide - NP_001139418
RefSeq Peptide - NP_059131
swissprot - Q9NYB5
swissprot - F5H6S4
Ensembl - ENSG00000139155
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slco1c1ENSDARG00000016749Danio rerio
 SLCO1C1ENSGALG00000013154Gallus gallus
 Q9ERB5ENSMUSG00000030235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NPD5 / SLCO1B3 / solute carrier organic anion transporter family member 1B3ENSG0000011170042
AC011604.2ENSG0000025704642
Q9Y6L6 / SLCO1B1 / solute carrier organic anion transporter family member 1B1ENSG0000013453841
P46721 / SLCO1A2 / solute carrier organic anion transporter family member 1A2ENSG0000008445340
G3V0H7 / SLCO1B7 / solute carrier organic anion transporter family member 1B7 (putative)ENSG0000020575437
Q9UIG8 / SLCO3A1 / solute carrier organic anion transporter family member 3A1ENSG0000017646330
Q92959 / SLCO2A1 / solute carrier organic anion transporter family member 2A1ENSG0000017464027
Q9H2Y9 / SLCO5A1 / solute carrier organic anion transporter family member 5A1ENSG0000013757126
O94956 / SLCO2B1 / solute carrier organic anion transporter family member 2B1ENSG0000013749126
Q96BD0 / SLCO4A1 / solute carrier organic anion transporter family member 4A1ENSG0000010118725
Q6ZQN7 / SLCO4C1 / solute carrier organic anion transporter family member 4C1ENSG0000017393025
Q86UG4 / SLCO6A1 / solute carrier organic anion transporter family member 6A1ENSG0000020535919


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR030764  Solute carrier organic anion transporter family member 1C1
 IPR036058  Kazal domain superfamily
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015711 organic anion transport IEA
 biological_processGO:0015721 bile acid and bile salt transport IEA
 biological_processGO:0043252 sodium-independent organic anion transport TAS
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070327 thyroid hormone transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008514 organic anion transmembrane transporter activity IEA
 molecular_functionGO:0015125 bile acid transmembrane transporter activity IBA
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA
 molecular_functionGO:0015349 thyroid hormone transmembrane transporter activity TAS


Pathways (from Reactome)
Pathway description
Transport of organic anions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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