ENSG00000205359


Homo sapiens

Features
Gene ID: ENSG00000205359
  
Biological name :SLCO6A1
  
Synonyms : Q86UG4 / SLCO6A1 / solute carrier organic anion transporter family member 6A1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q21.1
Gene start: 102371782
Gene end: 102499016
  
Corresponding Affymetrix probe sets: 1552745_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000421990
Ensembl peptide - ENSP00000373671
Ensembl peptide - ENSP00000421339
Ensembl peptide - ENSP00000421846
Ensembl peptide - ENSP00000369135
NCBI entrez gene - 133482     See in Manteia.
OMIM - 613365
RefSeq - XM_011543153
RefSeq - NM_001289002
RefSeq - NM_001289004
RefSeq - NM_001308014
RefSeq - NM_173488
RefSeq - XM_005271874
RefSeq - XM_011543147
RefSeq - XM_011543148
RefSeq - XM_011543150
RefSeq Peptide - NP_001294943
RefSeq Peptide - NP_775759
RefSeq Peptide - NP_001275931
RefSeq Peptide - NP_001275933
swissprot - Q86UG4
swissprot - H0Y8R6
swissprot - C9J020
swissprot - A0A140VJU7
Ensembl - ENSG00000205359
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Slco6c1ENSMUSG00000026331Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6ZQN7 / SLCO4C1 / solute carrier organic anion transporter family member 4C1ENSG0000017393036
Q96BD0 / SLCO4A1 / solute carrier organic anion transporter family member 4A1ENSG0000010118728
Q9H2Y9 / SLCO5A1 / solute carrier organic anion transporter family member 5A1ENSG0000013757125
Q9UIG8 / SLCO3A1 / solute carrier organic anion transporter family member 3A1ENSG0000017646321
Q9Y6L6 / SLCO1B1 / solute carrier organic anion transporter family member 1B1ENSG0000013453821
AC011604.2ENSG0000025704620
Q9NPD5 / SLCO1B3 / solute carrier organic anion transporter family member 1B3ENSG0000011170020
O94956 / SLCO2B1 / solute carrier organic anion transporter family member 2B1ENSG0000013749120
Q92959 / SLCO2A1 / solute carrier organic anion transporter family member 2A1ENSG0000017464020
Q9NYB5 / SLCO1C1 / solute carrier organic anion transporter family member 1C1ENSG0000013915519
P46721 / SLCO1A2 / solute carrier organic anion transporter family member 1A2ENSG0000008445318
G3V0H7 / SLCO1B7 / solute carrier organic anion transporter family member 1B7 (putative)ENSG0000020575418


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR036058  Kazal domain superfamily
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0043252 sodium-independent organic anion transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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