ENSMUSG00000026331


Mus musculus

Features
Gene ID: ENSMUSG00000026331
  
Biological name :Slco6c1
  
Synonyms : Slco6c1 / solute carrier organic anion transporter family, member 6c1
  
Possible biological names infered from orthology : Q86UG4 / SLCO6A1 / solute carrier organic anion transporter family member 6A1
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: D
Gene start: 97059038
Gene end: 97128301
  
Corresponding Affymetrix probe sets: 10356918 (MoGene1.0st)   1429406_at (Mouse Genome 430 2.0 Array)   1459092_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000027569
Ensembl peptide - ENSMUSP00000140791
NCBI entrez gene - 74441     See in Manteia.
MGI - MGI:1921691
RefSeq - XM_006529913
RefSeq - NM_028942
RefSeq Peptide - NP_083218
swissprot - Q8C0X7
swissprot - Q9D4B7
Ensembl - ENSMUSG00000026331
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q86UG4ENSG00000205359Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BGD4 / Slco4c1 / Solute carrier organic anion transporter family member 4C1 / Q6ZQN7*ENSMUSG0000004069325
Slco5a1 / solute carrier organic anion transporter family, member 5A1 / Q9H2Y9*ENSMUSG0000002593821
Q8K078 / Slco4a1 / Mus musculus solute carrier organic anion transporter family, member 4a1 (Slco4a1), transcript variant 2, mRNA. / Q96BD0* / solute carrier organic anion transporter famil...ENSMUSG0000003896321
Q99J94 / Slco1a6 / Solute carrier organic anion transporter family member 1A6 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000007926220
Q9JJL3 / Slco1b2 / Solute carrier organic anion transporter family member 1B2 / Q9Y6L6* / G3V0H7* / Q9NPD5* / SLCO1B1* / SLCO1B3* / SLCO1B7* / AC011604.2* / solute carrier organic anion tr...ENSMUSG0000003023619
Q8R3L5 / Slco3a1 / Solute carrier organic anion transporter family member 3A1 / Q9UIG8*ENSMUSG0000002579019
Gm5724 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000008492719
Q9EP96 / Slco1a4 / Mus musculus solute carrier organic anion transporter family, member 1a4 (Slco1a4), transcript variant 2, mRNA. / P46721* / SLCO1A2* / solute carrier organic anion transp...ENSMUSG0000003023719
Slco1a5 / solute carrier organic anion transporter family, member 1a5 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000006397519
Q9QXZ6 / Slco1a1 / solute carrier organic anion transporter family, member 1a1 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000004169819
Q8BXB6 / Slco2b1 / solute carrier organic anion transporter family, member 2b1 / O94956*ENSMUSG0000003073719
Q9ERB5 / Slco1c1 / solute carrier organic anion transporter family, member 1c1 / Q9NYB5*ENSMUSG0000003023518
Q9EPT5 / Slco2a1 / solute carrier organic anion transporter family, member 2a1 / Q92959*ENSMUSG0000003254817


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR036058  Kazal domain superfamily
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015711 organic anion transport ISO
 biological_processGO:0043252 sodium-independent organic anion transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008514 organic anion transmembrane transporter activity ISO
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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