ENSMUSG00000040693


Mus musculus

Features
Gene ID: ENSMUSG00000040693
  
Biological name :Slco4c1
  
Synonyms : Q8BGD4 / Slco4c1 / Solute carrier organic anion transporter family member 4C1
  
Possible biological names infered from orthology : Q6ZQN7
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: D
Gene start: 96816270
Gene end: 96872171
  
Corresponding Affymetrix probe sets: 10356886 (MoGene1.0st)   1437870_at (Mouse Genome 430 2.0 Array)   1460616_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000071875
NCBI entrez gene - 227394     See in Manteia.
MGI - MGI:2442784
RefSeq - NM_172658
RefSeq Peptide - NP_766246
swissprot - Q8BGD4
Ensembl - ENSMUSG00000040693
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLCO4C1ENSGALG00000026768Gallus gallus
 Q6ZQN7ENSG00000173930Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8K078 / Slco4a1 / Mus musculus solute carrier organic anion transporter family, member 4a1 (Slco4a1), transcript variant 2, mRNA. / Q96BD0* / solute carrier organic anion transporter famil...ENSMUSG0000003896339
Slco5a1 / solute carrier organic anion transporter family, member 5A1 / Q9H2Y9*ENSMUSG0000002593835
Q8R3L5 / Slco3a1 / Solute carrier organic anion transporter family member 3A1 / Q9UIG8*ENSMUSG0000002579030
Q8BXB6 / Slco2b1 / solute carrier organic anion transporter family, member 2b1 / O94956*ENSMUSG0000003073727
Q9EPT5 / Slco2a1 / solute carrier organic anion transporter family, member 2a1 / Q92959*ENSMUSG0000003254826
Q9ERB5 / Slco1c1 / solute carrier organic anion transporter family, member 1c1 / Q9NYB5*ENSMUSG0000003023526
Q9QXZ6 / Slco1a1 / solute carrier organic anion transporter family, member 1a1 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000004169825
Q99J94 / Slco1a6 / Solute carrier organic anion transporter family member 1A6 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000007926225
Slco1a5 / solute carrier organic anion transporter family, member 1a5 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000006397525
Q9EP96 / Slco1a4 / Mus musculus solute carrier organic anion transporter family, member 1a4 (Slco1a4), transcript variant 2, mRNA. / P46721* / SLCO1A2* / solute carrier organic anion transp...ENSMUSG0000003023725
Gm5724 / P46721* / SLCO1A2* / solute carrier organic anion transporter family member 1A2*ENSMUSG0000008492724
Q9JJL3 / Slco1b2 / Solute carrier organic anion transporter family member 1B2 / Q9Y6L6* / G3V0H7* / Q9NPD5* / SLCO1B1* / SLCO1B3* / SLCO1B7* / AC011604.2* / solute carrier organic anion tr...ENSMUSG0000003023624
Slco6c1 / solute carrier organic anion transporter family, member 6c1 / Q86UG4* / SLCO6A1* / solute carrier organic anion transporter family member 6A1*ENSMUSG0000002633124


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR036058  Kazal domain superfamily
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0015711 organic anion transport ISO
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043252 sodium-independent organic anion transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008514 organic anion transmembrane transporter activity ISO
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Transport of organic anions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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