ENSG00000177000


Homo sapiens

Features
Gene ID: ENSG00000177000
  
Biological name :MTHFR
  
Synonyms : methylenetetrahydrofolate reductase / MTHFR / P42898
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.22
Gene start: 11785723
Gene end: 11806920
  
Corresponding Affymetrix probe sets: 206800_at (Human Genome U133 Plus 2.0 Array)   217070_at (Human Genome U133 Plus 2.0 Array)   217071_s_at (Human Genome U133 Plus 2.0 Array)   226929_at (Human Genome U133 Plus 2.0 Array)   239035_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000405082
Ensembl peptide - ENSP00000493262
Ensembl peptide - ENSP00000493116
Ensembl peptide - ENSP00000493098
Ensembl peptide - ENSP00000492937
Ensembl peptide - ENSP00000408307
Ensembl peptide - ENSP00000365669
Ensembl peptide - ENSP00000365767
Ensembl peptide - ENSP00000365770
Ensembl peptide - ENSP00000365775
Ensembl peptide - ENSP00000365777
Ensembl peptide - ENSP00000398908
NCBI entrez gene - 4524     See in Manteia.
OMIM - 607093
RefSeq - XM_005263458
RefSeq - XM_005263460
RefSeq - XM_005263462
RefSeq - NM_005957
RefSeq - XM_011541495
RefSeq - XM_011541496
RefSeq - XM_017001328
RefSeq - XM_005263463
RefSeq Peptide - NP_005948
RefSeq Peptide - NP_001317287
swissprot - P42898
swissprot - A0A286YF47
swissprot - A0A286YF17
swissprot - A0A1B0GXD9
swissprot - F8W9T8
swissprot - L7P8G6
swissprot - A0A286YFD0
swissprot - Q5SNW5
swissprot - Q5SNW7
Ensembl - ENSG00000177000
  
Related genetic diseases (OMIM): 181500 - {Schizophrenia, susceptibility to}, 181500
  188050 - {Thromboembolism, susceptibility to}, 188050
  236250 - Homocystinuria due to MTHFR deficiency, 236250
  601634 - {Neural tube defects, susceptibility to}, 601634
  607093 - {Vascular disease, susceptibility to}
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mthfrENSDARG00000053087Danio rerio
 MTHFRENSGALG00000004612Gallus gallus
 MthfrENSMUSG00000029009Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003171  Methylenetetrahydrofolate reductase
 IPR004621  Eukaryotic-type methylenetetrahydrofolate reductase
 IPR029041  FAD-linked oxidoreductase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0006520 cellular amino acid metabolic process TAS
 biological_processGO:0006555 methionine metabolic process IGI
 biological_processGO:0008015 blood circulation TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0031060 regulation of histone methylation IDA
 biological_processGO:0033274 response to vitamin B2 IEA
 biological_processGO:0035999 tetrahydrofolate interconversion IGI
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0043200 response to amino acid IEA
 biological_processGO:0046500 S-adenosylmethionine metabolic process IEA
 biological_processGO:0046653 tetrahydrofolate metabolic process IEA
 biological_processGO:0046655 folic acid metabolic process TAS
 biological_processGO:0050667 homocysteine metabolic process IDA
 biological_processGO:0051593 response to folic acid IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070555 response to interleukin-1 IEA
 biological_processGO:0070829 heterochromatin maintenance IDA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity TAS
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0044877 protein-containing complex binding IPI
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IDA
 molecular_functionGO:0050661 NADP binding IEA
 molecular_functionGO:0072341 modified amino acid binding IDA


Pathways (from Reactome)
Pathway description
Metabolism of folate and pterines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000708 Behavioural/Psychiatric Abnormality 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001297 Stroke 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0002156 Homocystinuria 
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 HP:0002160 Homocystinemia 
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 HP:0002311 Incoordination 
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 HP:0002323 Anencephaly 
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0008207 Primary adrenal insufficiency 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000177000 MTHFR / P42898 / methylenetetrahydrofolate reductase  / complex






 

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