ENSG00000177646


Homo sapiens

Features
Gene ID: ENSG00000177646
  
Biological name :ACAD9
  
Synonyms : ACAD9 / acyl-CoA dehydrogenase family member 9 / Q9H845
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q21.3
Gene start: 128879596
Gene end: 128916067
  
Corresponding Affymetrix probe sets: 224160_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422683
Ensembl peptide - ENSP00000427283
Ensembl peptide - ENSP00000426277
Ensembl peptide - ENSP00000426189
Ensembl peptide - ENSP00000425346
Ensembl peptide - ENSP00000425226
Ensembl peptide - ENSP00000423758
Ensembl peptide - ENSP00000312618
Ensembl peptide - ENSP00000422020
NCBI entrez gene - 28976     See in Manteia.
OMIM - 611103
RefSeq - XM_017006264
RefSeq - NM_014049
RefSeq Peptide - NP_054768
swissprot - D6R9Z3
swissprot - D6RGK6
swissprot - H0Y8Z9
swissprot - D6RJA8
swissprot - Q9H845
swissprot - D6RCD8
swissprot - D6RDK9
Ensembl - ENSG00000177646
  
Related genetic diseases (OMIM): 611126 - Mitochondrial complex I deficiency due to ACAD9 deficiency, 611126
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 acad9ENSDARG00000055620Danio rerio
 ACAD9ENSGALG00000005034Gallus gallus
 Acad9ENSMUSG00000027710Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACADVL / P49748 / acyl-CoA dehydrogenase very long chainENSG0000007277845
ACADSB / P45954 / acyl-CoA dehydrogenase short/branched chainENSG0000019617723
ACADS / P16219 / acyl-CoA dehydrogenase short chainENSG0000012297123
IVD / P26440 / isovaleryl-CoA dehydrogenaseENSG0000012892822
ACADM / P11310 / acyl-CoA dehydrogenase medium chainENSG0000011705422
ACAD8 / Q9UKU7 / acyl-CoA dehydrogenase family member 8ENSG0000015149820
ACADL / P28330 / acyl-CoA dehydrogenase long chainENSG0000011536119
GCDH / Q92947 / glutaryl-CoA dehydrogenaseENSG0000010560719


Protein motifs (from Interpro)
Interpro ID Name
 IPR006089  Acyl-CoA dehydrogenase, conserved site
 IPR006091  Acyl-CoA oxidase/dehydrogenase, central domain
 IPR009075  Acyl-CoA dehydrogenase/oxidase C-terminal
 IPR009100  Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
 IPR013786  Acyl-CoA dehydrogenase/oxidase, N-terminal
 IPR036250  Acyl-CoA dehydrogenase-like, C-terminal
 IPR037069  Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001676 long-chain fatty acid metabolic process IDA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0032981 mitochondrial respiratory chain complex I assembly TAS
 biological_processGO:0051791 medium-chain fatty acid metabolic process IDA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0030425 dendrite IDA
 cellular_componentGO:0031966 mitochondrial membrane IDA
 molecular_functionGO:0003995 acyl-CoA dehydrogenase activity IEA
 molecular_functionGO:0004466 long-chain-acyl-CoA dehydrogenase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA
 molecular_functionGO:0070991 medium-chain-acyl-CoA dehydrogenase activity IDA


Pathways (from Reactome)
Pathway description
Complex I biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001297 Stroke 
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 HP:0001298 Encephalopathy 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0001399 Hepatic failure 
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 HP:0001414 Microvesicular steatosis 
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 HP:0001508 Failure to thrive 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001645 Sudden cardiac death 
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 HP:0001873 Thrombocytopenia 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001958 Nonketotic hypoglycemia 
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 HP:0001987 Hyperammonemia 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002181 Cerebral edema "Abnormal accumulation of fluid in the brain." [HPO:curators]
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003215 Dicarboxylic aciduria 
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 HP:0003234 Decreased plasma carnitine 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003473 Mild-moderate fatigable weakness of limb muscles 
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 HP:0003546 Exercise intolerance 
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 HP:0006554 Acute hepatic failure "Hepatic failure refers to the inability of the liver to perform its normal synthetic and metabolic functions, which can result in coagulopathy and alteration in the mental status of a previously healthy individual. Hepatic failure is defined as acute if there is onset of encephalopathy within 8 weeks of the onset of symptoms in a patient with a previously healthy liver." [HPO:curators]
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 HP:0008151 Prolonged prothrombin and partial thromboplastin times 
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 HP:0008331 Elevated creatine kinase after exercise 
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 HP:0011695 Cerebellar hemorrhage "`Hemorrhage` (MPATH:119) into the parenchyma of the cerebellum." [HPO:probinson]
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 HP:0011923 Decreased activity of mitochondrial complex I "A reduction in the activity of the `mitochondrial respiratory chain complex I` (GO:0005747), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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 HP:0025435 Increased lactate dehydrogenase activity "An elevated activity of the enzyme lactate dehydrogenase in serum." []
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 HP:0045045 Elevated plasma acylcarnitine levels 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000130159 ECSIT / Q9BQ95 / ECSIT signalling integrator  / complex
 ENSG00000137806 Q9Y375 / NDUFAF1 / NADH:ubiquinone oxidoreductase complex assembly factor 1  / complex
 ENSG00000171204 Q8IUX1 / TMEM126B / transmembrane protein 126B  / complex






 

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