ENSG00000117054


Homo sapiens

Features
Gene ID: ENSG00000117054
  
Biological name :ACADM
  
Synonyms : ACADM / acyl-CoA dehydrogenase medium chain / P11310
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p31.1
Gene start: 75724347
Gene end: 75787575
  
Corresponding Affymetrix probe sets: 202502_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000409612
Ensembl peptide - ENSP00000442324
Ensembl peptide - ENSP00000435584
Ensembl peptide - ENSP00000434823
Ensembl peptide - ENSP00000434284
Ensembl peptide - ENSP00000434092
Ensembl peptide - ENSP00000432522
Ensembl peptide - ENSP00000431953
Ensembl peptide - ENSP00000431372
Ensembl peptide - ENSP00000359871
Ensembl peptide - ENSP00000359878
NCBI entrez gene - 34     See in Manteia.
OMIM - 607008
RefSeq - NM_001286043
RefSeq - NM_001286044
RefSeq - NM_001286042
RefSeq - NM_000016
RefSeq - NM_001127328
RefSeq Peptide - NP_001272972
RefSeq Peptide - NP_001272973
RefSeq Peptide - NP_000007
RefSeq Peptide - NP_001120800
RefSeq Peptide - NP_001272971
swissprot - Q5T4U5
swissprot - E9PQA8
swissprot - E9PLN7
swissprot - E9PJM9
swissprot - E9PIX8
swissprot - B7Z9I1
swissprot - A0A0S2Z366
swissprot - H0YDT5
swissprot - P11310
swissprot - E9PRX4
Ensembl - ENSG00000117054
  
Related genetic diseases (OMIM): 201450 - Acyl-CoA dehydrogenase, medium chain, deficiency of, 201450
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 acadmENSDARG00000038900Danio rerio
 AcadmENSMUSG00000062908Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACADS / P16219 / acyl-CoA dehydrogenase short chainENSG0000012297134
ACADSB / P45954 / acyl-CoA dehydrogenase short/branched chainENSG0000019617732
ACAD9 / Q9H845 / acyl-CoA dehydrogenase family member 9ENSG0000017764630
IVD / P26440 / isovaleryl-CoA dehydrogenaseENSG0000012892829
ACAD8 / Q9UKU7 / acyl-CoA dehydrogenase family member 8ENSG0000015149829
ACADVL / P49748 / acyl-CoA dehydrogenase very long chainENSG0000007277828
ACADL / P28330 / acyl-CoA dehydrogenase long chainENSG0000011536127
GCDH / Q92947 / glutaryl-CoA dehydrogenaseENSG0000010560725


Protein motifs (from Interpro)
Interpro ID Name
 IPR006089  Acyl-CoA dehydrogenase, conserved site
 IPR006091  Acyl-CoA oxidase/dehydrogenase, central domain
 IPR009075  Acyl-CoA dehydrogenase/oxidase C-terminal
 IPR009100  Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
 IPR013786  Acyl-CoA dehydrogenase/oxidase, N-terminal
 IPR034180  Medium-chain specific acyl-CoA dehydrogenase
 IPR036250  Acyl-CoA dehydrogenase-like, C-terminal
 IPR037069  Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001889 liver development IEA
 biological_processGO:0005978 glycogen biosynthetic process IEA
 biological_processGO:0006082 organic acid metabolic process IEA
 biological_processGO:0006111 regulation of gluconeogenesis IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009409 response to cold IEA
 biological_processGO:0009437 carnitine metabolic process IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0019216 regulation of lipid metabolic process TAS
 biological_processGO:0019254 carnitine metabolic process, CoA-linked IMP
 biological_processGO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IMP
 biological_processGO:0042594 response to starvation IEA
 biological_processGO:0045329 carnitine biosynthetic process IMP
 biological_processGO:0051791 medium-chain fatty acid metabolic process IDA
 biological_processGO:0051793 medium-chain fatty acid catabolic process IDA
 biological_processGO:0055007 cardiac muscle cell differentiation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix IDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0030424 axon IDA
 cellular_componentGO:0031966 mitochondrial membrane IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003995 acyl-CoA dehydrogenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA
 molecular_functionGO:0042802 identical protein binding IDA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA
 molecular_functionGO:0070991 medium-chain-acyl-CoA dehydrogenase activity IEA


Pathways (from Reactome)
Pathway description
PPARA activates gene expression
mitochondrial fatty acid beta-oxidation of unsaturated fatty acids
Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
Beta oxidation of octanoyl-CoA to hexanoyl-CoA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001259 Coma 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0001942 Metabolic acidosis 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0002013 Vomiting 
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 HP:0002181 Cerebral edema "Abnormal accumulation of fluid in the brain." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003108 Hyperglycinuria 
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 HP:0003234 Decreased plasma carnitine 
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 HP:0008309 Medium chain dicarboxylic aciduria 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000117054 ACADM / P11310 / acyl-CoA dehydrogenase medium chain  / complex






 

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