ENSG00000128928


Homo sapiens

Features
Gene ID: ENSG00000128928
  
Biological name :IVD
  
Synonyms : isovaleryl-CoA dehydrogenase / IVD / P26440
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q15.1
Gene start: 40405795
Gene end: 40435947
  
Corresponding Affymetrix probe sets: 203681_at (Human Genome U133 Plus 2.0 Array)   203682_s_at (Human Genome U133 Plus 2.0 Array)   216958_s_at (Human Genome U133 Plus 2.0 Array)   225311_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453929
Ensembl peptide - ENSP00000453821
Ensembl peptide - ENSP00000454145
Ensembl peptide - ENSP00000479359
Ensembl peptide - ENSP00000417256
Ensembl peptide - ENSP00000417990
Ensembl peptide - ENSP00000418397
Ensembl peptide - ENSP00000452949
Ensembl peptide - ENSP00000453146
NCBI entrez gene - 3712     See in Manteia.
OMIM - 607036
RefSeq - XM_017022158
RefSeq - XM_006720492
RefSeq - XM_006720495
RefSeq - XM_017022149
RefSeq - XM_017022150
RefSeq - XM_017022151
RefSeq - XM_017022152
RefSeq - XM_017022153
RefSeq - XM_017022154
RefSeq - XM_017022155
RefSeq - XM_017022156
RefSeq - XM_017022157
RefSeq - NM_001159508
RefSeq - NM_002225
RefSeq - XM_005254350
RefSeq Peptide - NP_001152980
RefSeq Peptide - NP_002216
swissprot - H0YLC3
swissprot - H0YN10
swissprot - H0YNA4
swissprot - A0A0A0MT83
swissprot - H7C4G6
swissprot - P26440
swissprot - A0A087WVD3
swissprot - H0YNT5
swissprot - H0YKV0
Ensembl - ENSG00000128928
  
Related genetic diseases (OMIM): 243500 - Isovaleric acidemia, 243500
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ivdENSDARG00000042853Danio rerio
 IVDENSGALG00000040267Gallus gallus
 IvdENSMUSG00000027332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACADS / P16219 / acyl-CoA dehydrogenase short chainENSG0000012297135
ACAD9 / Q9H845 / acyl-CoA dehydrogenase family member 9ENSG0000017764632
ACADSB / P45954 / acyl-CoA dehydrogenase short/branched chainENSG0000019617731
ACADVL / P49748 / acyl-CoA dehydrogenase very long chainENSG0000007277831
ACADL / P28330 / acyl-CoA dehydrogenase long chainENSG0000011536131
ACADM / P11310 / acyl-CoA dehydrogenase medium chainENSG0000011705431
ACAD8 / Q9UKU7 / acyl-CoA dehydrogenase family member 8ENSG0000015149829
GCDH / Q92947 / glutaryl-CoA dehydrogenaseENSG0000010560728


Protein motifs (from Interpro)
Interpro ID Name
 IPR006089  Acyl-CoA dehydrogenase, conserved site
 IPR006091  Acyl-CoA oxidase/dehydrogenase, central domain
 IPR009075  Acyl-CoA dehydrogenase/oxidase C-terminal
 IPR009100  Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
 IPR013786  Acyl-CoA dehydrogenase/oxidase, N-terminal
 IPR034183  Isovaleryl-CoA dehydrogenase
 IPR036250  Acyl-CoA dehydrogenase-like, C-terminal
 IPR037069  Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006552 leucine catabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009083 branched-chain amino acid catabolic process TAS
 biological_processGO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IDA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix NAS
 cellular_componentGO:0031966 mitochondrial membrane IEA
 molecular_functionGO:0003995 acyl-CoA dehydrogenase activity IEA
 molecular_functionGO:0008470 isovaleryl-CoA dehydrogenase activity EXP
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
Branched-chain amino acid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001254 Lethargy 
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 HP:0001259 Coma 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001873 Thrombocytopenia 
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 HP:0001876 Pancytopenia 
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 HP:0001882 Leukopenia 
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 HP:0001942 Metabolic acidosis 
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 HP:0001944 Dehydration 
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 HP:0001993 Ketoacidosis 
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 HP:0002013 Vomiting 
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 HP:0003108 Hyperglycinuria 
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 HP:0005528 Bone marrow hypoplasia 
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 HP:0011695 Cerebellar hemorrhage "`Hemorrhage` (MPATH:119) into the parenchyma of the cerebellum." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000128928 IVD / P26440 / isovaleryl-CoA dehydrogenase  / complex






 

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contact: otassy@igbmc.fr