ENSG00000182447


Homo sapiens

Features
Gene ID: ENSG00000182447
  
Biological name :OTOL1
  
Synonyms : A6NHN0 / OTOL1 / otolin 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q26.1
Gene start: 161496808
Gene end: 161503942
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000330808
NCBI entrez gene - 131149     See in Manteia.
RefSeq - NM_001080440
RefSeq Peptide - NP_001073909
swissprot - A6NHN0
Ensembl - ENSG00000182447
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A5PN28ENSDARG00000001771Danio rerio
 otol1bENSDARG00000058960Danio rerio
 OTOL1ENSGALG00000026305Gallus gallus
 Otol1ENSMUSG00000027788Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL8A1 / P27658 / collagen type VIII alpha 1 chainENSG0000014481035
Q03692 / COL10A1 / collagen type X alpha 1 chainENSG0000012350035
COL8A2 / P25067 / collagen type VIII alpha 2 chainENSG0000017181233
B2RNN3 / C1QTNF9B / C1q and TNF related 9BENSG0000020586332
P0C862 / C1QTNF9 / C1q and TNF related 9ENSG0000024065432
ADIPOQ / Q15848 / adiponectin, C1Q and collagen domain containingENSG0000018109222
Q9BXJ2 / C1QTNF7 / C1q and TNF related 7ENSG0000016314521
Q9BXJ5 / C1QTNF2 / C1q and TNF related 2ENSG0000014586120
Q9BXJ0 / C1QTNF5 / C1q and TNF related 5ENSG0000022395319
C1QB / P02746 / complement C1q B chainENSG0000017336918
C1QC / P02747 / complement C1q C chainENSG0000015918918


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr