ENSG00000182810


Homo sapiens

Features
Gene ID: ENSG00000182810
  
Biological name :DDX28
  
Synonyms : DDX28 / DEAD-box helicase 28 / Q9NUL7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q22.1
Gene start: 68021274
Gene end: 68023442
  
Corresponding Affymetrix probe sets: 203784_s_at (Human Genome U133 Plus 2.0 Array)   203785_s_at (Human Genome U133 Plus 2.0 Array)   214025_at (Human Genome U133 Plus 2.0 Array)   40255_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000332340
NCBI entrez gene - 55794     See in Manteia.
OMIM - 607618
RefSeq - NM_018380
RefSeq Peptide - NP_060850
swissprot - Q9NUL7
Ensembl - ENSG00000182810
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx28ENSDARG00000060411Danio rerio
 ENSGALG00000003415Gallus gallus
 Ddx28ENSMUSG00000045538Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDX47 / Q9H0S4 / DEAD-box helicase 47ENSG0000021378224


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:1902775 mitochondrial large ribosomal subunit assembly IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0035770 ribonucleoprotein granule IDA
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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