ENSGALG00000003415


Gallus gallus

Features
Gene ID: ENSGALG00000003415
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : DDX28 / DEAD-box helicase 28 / Probable ATP-dependent RNA helicase DDX28 / Q9CWT6 / Q9NUL7
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 3525436
Gene end: 3526031
  
Corresponding Affymetrix probe sets: Gga.7452.1.S1_at (Chicken Array)   Gga.7452.2.S1_s_at (Chicken Array)   GgaAffx.25851.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005391
NCBI entrez gene - 427544     See in Manteia.
RefSeq - XM_015292365
swissprot - F1NSN3
Ensembl - ENSGALG00000003415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx28ENSDARG00000060411Danio rerio
 DDX28ENSG00000182810Homo sapiens
 Ddx28ENSMUSG00000045538Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDX47 / DEAD-box helicase 47 / Q9CWX9* / Q9H0S4* / Probable ATP-dependent RNA helicase DDX47 *ENSGALG0000001179428


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr