ENSG00000183337


Homo sapiens

Features
Gene ID: ENSG00000183337
  
Biological name :BCOR
  
Synonyms : BCL6 corepressor / BCOR / Q6W2J9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: p11.4
Gene start: 40049815
Gene end: 40177329
  
Corresponding Affymetrix probe sets: 219433_at (Human Genome U133 Plus 2.0 Array)   223566_s_at (Human Genome U133 Plus 2.0 Array)   223915_at (Human Genome U133 Plus 2.0 Array)   223916_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000390273
Ensembl peptide - ENSP00000387552
Ensembl peptide - ENSP00000403823
Ensembl peptide - ENSP00000483217
Ensembl peptide - ENSP00000408006
Ensembl peptide - ENSP00000345923
Ensembl peptide - ENSP00000367705
Ensembl peptide - ENSP00000367716
Ensembl peptide - ENSP00000367724
Ensembl peptide - ENSP00000380512
Ensembl peptide - ENSP00000384485
NCBI entrez gene - 54880     See in Manteia.
OMIM - 300485
RefSeq - XM_017029616
RefSeq - NM_001123384
RefSeq - NM_001123385
RefSeq - NM_017745
RefSeq - XM_005272616
RefSeq - XM_005272618
RefSeq - XM_005272619
RefSeq - XM_005272620
RefSeq - XM_006724536
RefSeq - XM_011543929
RefSeq - XM_011543930
RefSeq - XM_011543931
RefSeq - XM_017029615
RefSeq - NM_001123383
RefSeq Peptide - NP_001116856
RefSeq Peptide - NP_001116857
RefSeq Peptide - NP_060215
RefSeq Peptide - NP_001116855
swissprot - H7C231
swissprot - H7C2V9
swissprot - A1A564
swissprot - C9JHP3
swissprot - Q6W2J9
swissprot - A6NE70
swissprot - H7BYY2
swissprot - H7BZ37
Ensembl - ENSG00000183337
  
Related genetic diseases (OMIM): 300166 - Microphthalmia, syndromic 2, 300166
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bcorENSDARG00000017798Danio rerio
 BCORENSGALG00000016245Gallus gallus
 BcorENSMUSG00000040363Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BCORL1 / Q5H9F3 / BCL6 corepressor like 1ENSG0000008518524
Q8N7Z5 / ANKRD31 / ankyrin repeat domain 31ENSG0000014570012
BARD1 / Q99728 / BRCA1 associated RING domain 1ENSG000001383768
TONSL / Q96HA7 / tonsoku like, DNA repair proteinENSG000001609498
SLF1 / Q9BQI6 / SMC5-SMC6 complex localization factor 1ENSG000001333028
Q6UB99 / ANKRD11 / ankyrin repeat domain 11ENSG000001675227
Q6UB98 / ANKRD12 / ankyrin repeat domain 12ENSG000001017456


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR031628  BCL-6 corepressor, non-ankyrin-repeat domain
 IPR032365  BCL-6 corepressor, PCGF1 binding domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0000415 negative regulation of histone H3-K36 methylation IMP
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007507 heart development IMP
 biological_processGO:0030502 negative regulation of bone mineralization IMP
 biological_processGO:0035518 histone H2A monoubiquitination IDA
 biological_processGO:0042476 odontogenesis IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0051572 negative regulation of histone H3-K4 methylation IMP
 biological_processGO:0060021 roof of mouth development IMP
 biological_processGO:0065001 specification of axis polarity IMP
 biological_processGO:0070171 negative regulation of tooth mineralization IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031519 PcG protein complex IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IMP
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IPI
 molecular_functionGO:0031072 heat shock protein binding IDA
 molecular_functionGO:0042826 histone deacetylase binding IPI
 molecular_functionGO:0044212 transcription regulatory region DNA binding IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
Show

 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
Show

 HP:0000072 Hydroureter "The distention of the ureter with urine." [HPO:curators]
Show

 HP:0000089 Renal hypoplasia 
Show

 HP:0000126 Hydronephrosis 
Show

 HP:0000176 Submucous cleft palate "A cleft palate that is covered by the mucous membrane of the roof of the mouth, which can make the cleft more difficult to observe upon physical examination. Soft-palate submucous clefts are characterized by a midline deficiency or lack of muscle tissue. Hard-palate submucous clefts are characterized by bony defects in the midline of the bony palate. It may be possible to detect a submucous cleft palate upon palpation as a notch in the bony palate." [HPO:curators, pmid:19779505]
Show

 HP:0000193 Bifid uvula "A split or cleft uvula." [HPO:curators]
Show

 HP:0000202 Cleft lip/palate 
Show

 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000275 Narrow face 
Show

 HP:0000276 Long face 
Show

 HP:0000343 Long philtrum 
Show

 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
Show

 HP:0000365 Hearing loss 
Show

 HP:0000368 Low-set, posteriorly rotated ears 
Show

 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
Show

 HP:0000384 Preauricular skin tag "A rudimentary tag of ear tissue often containing a core of cartilage and located just in front of the auricle (outer part of the ear)." [HPO:curators]
Show

 HP:0000396 Overfolded helices "A condition in which the upper edge of the ear is folded over to a greater degree than normal." [HPO:curators]
Show

 HP:0000403 Recurrent otitis media 
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000426 Prominent nasal bridge 
Show

 HP:0000455 Broad nasal tip 
Show

 HP:0000456 Bifid nasal tip "A splitting of the nasal tip. This is a rare congenital deformity due to failure of the paired nasal processes to fuse to a single midline organ during early gestation." [HPO:curators]
Show

 HP:0000465 Webbed neck 
Show

 HP:0000482 Microcornea "A congenital abnormality of the `cornea` (FMA:58238) in which the cornea and the anterior segment of the eye are smaller than normal. The horizontal diameter of the cornea does not reach 10 mm even in adulthood." [HPO:probinson]
Show

 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
Show

 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
Show

 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
Show

 HP:0000528 Anophthalmia "Absence of a true eyeball." [HPO:curators]
Show

 HP:0000541 Detached retina 
Show

 HP:0000567 Chorioretinal coloboma 
Show

 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
Show

 HP:0000572 Visual loss 
Show

 HP:0000574 Thick eyebrows 
Show

 HP:0000577 Exotropia 
Show

 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
Show

 HP:0000588 Optic nerve coloboma 
Show

 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
Show

 HP:0000618 Blindness 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000667 Phthisis bulbi "Atrophy of the eyeball with blindness and decreased intraocular pressure due to end-stage intraocular disease." [HPO:curators]
Show

 HP:0000677 Oligodontia "The condition of missing over 6 teeth (Missing up to 6 teeth is referred to a hypodontia)." [HPO:curators]
Show

 HP:0000678 Dental overcrowding 
Show

 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
Show

 HP:0000689 Dental malocclusion "Dental malocclusion refers to an abnormality of the occlusion, or alignment, of the teeth and the way the upper and lower teeth fit together, resulting in overcrowding of teeth or in abnormal bite patterns." [HPO:curators]
Show

 HP:0000690 Absent upper lateral incisors 
Show

 HP:0000692 Misalignment of teeth 
Show

 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
Show

 HP:0000729 Pervasive developmental disorder 
Show

 HP:0000742 Self-mutilation 
Show

 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
Show

 HP:0000774 Narrow chest 
Show

 HP:0000821 Hypothyroidism 
Show

 HP:0000846 Adrenal insufficiency 
Show

 HP:0000889 Abnormality of the clavicles "Any abnormality of the clavicles (collar bones)." [HPO:curators]
Show

 HP:0000894 Short clavicles 
Show

 HP:0001018 Abnormal palmar dermatoglyphics "An abnormality of the dermatoglyphs of the palms." [HPO:curators]
Show

 HP:0001083 Ectopia lentis 
Show

 HP:0001153 Septate vagina "The presence of a vaginal septum, thereby creating a vaginal duplication. The septum is longitudinal in the majority of cases." [HPO:curators]
Show

 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0001169 Broad hands 
Show

 HP:0001188 Clenched hands 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001264 Spastic diplegia "Spasticity (neuromuscular hypertonia) primarily in the muscles of the legs, hips, and pelvis." [HPO:curators]
Show

 HP:0001270 Motor retardation 
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001371 Contractures 
Show

 HP:0001417 X-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the X chromosome." [HPO:curators]
Show

 HP:0001423 X-linked dominant inheritance "A mode of inheritance that is observed for dominant traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked dominant disorders tend to manifest very severely in affected males. The severity of manifestation in females may depend on the degree of skewed X inactivation." [HPO:curators]
Show

 HP:0001510 Growth retardation 
Show

 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
Show

 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
Show

 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
Show

 HP:0001634 Mitral valve prolapse 
Show

 HP:0001642 Pulmonic stenosis "A narrowing of the right ventricular outflow tract that can occur at the pulmonary valve (valvular stenosis) or just below the pulmonary valve (infundibular stenosis). Infundibular pulmonic stenosis is mostly caused by overgrowth of the heart muscle wall (hypertrophy of the septoparietal trabeculae). Pulmonic stenosis is often seen as a part of Fallot s tetralogy, in which case the events leading to the formation of the overriding aorta are also believed to be a cause of the pulmonic stenosis. The pulmonic stenosis is the major cause of the malformations seen in patients with Fallot tetralogy, with the other associated malformations acting as compensatory mechanisms to the pulmonic stenosis. The degree of stenosis varies between individuals with TOF, and is the primary determinant of symptoms and severity. This malformation is infrequently described as sub-pulmonary stenosis or subpulmonary obstruction." [HPO:curators]
Show

 HP:0001643 Patent ductus arteriosus 
Show

 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
Show

 HP:0001650 Aortic stenosis "The presence of a stenosis (narrowing) of the aortic valve." [HPO:curators]
Show

 HP:0001651 Dextrocardia "A left-right reversal (or "mirror reflection") of the anatomical location of the heart in which the heart is locate on the right side in stead of the left." [HPO:sdoelken]
Show

 HP:0001671 Abnormality of the cardiac septa 
Show

 HP:0001719 Double outlet right ventricle 
Show

 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
Show

 HP:0001765 Hammer toes 
Show

 HP:0002021 Pyloric stenosis 
Show

 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
Show

 HP:0002035 Rectal prolapse 
Show

 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0002089 Pulmonary hypoplasia 
Show

 HP:0002167 Neurological speech impairment 
Show

 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
Show

 HP:0002313 Spastic paraparesis 
Show

 HP:0002553 Arched eyebrows 
Show

 HP:0002566 Intestinal malrotation "An abnormality of the intestinal rotation and fixation that normally occurs during the development of the gut. This can lead to volvulus, or twisting of the intestine that causes obstruction and necrosis." [HPO:curators]
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
Show

 HP:0002751 Kyphoscoliosis 
Show

 HP:0002808 Kyphosis 
Show

 HP:0002857 Genu valgum 
Show

 HP:0002938 Lumbar hyperlordosis 
Show

 HP:0002967 Cubitus valgus 
Show

 HP:0002974 Radioulnar synostosis "An abnormal osseous union (fusion) between the radius and the ulna." [HPO:curators]
Show

 HP:0003043 Abnormality of the shoulder "An abnormality of the shoulder, which is defined as the structures surrounding the shoulder joint where the humerus attaches to the scapula." [HPO:curators]
Show

 HP:0003307 Hyperlordosis 
Show

 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0004325 Decreased body weight 
Show

 HP:0004691 2-3 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes two and three." [HPO:sdoelken]
Show

 HP:0004969 peripheral pulmonary artery stenosis 
Show

 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0006315 Single median maxillary central incisor "The presence of a single, centrally located maxillary `Incisor tooth` (FMA:12823) instead of the normal complement of a left and a right maxillary incisor tooth." [HPO:curators]
Show

 HP:0006335 Delayed loss of deciduous teeth 
Show

 HP:0006482 Abnormality of dental morphology 
Show

 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0007733 Laterally curved eyebrows 
Show

 HP:0007968 Persistent hyperplasia of primary vitreous 
Show

 HP:0008572 External ear malformation 
Show

 HP:0008678 Renal hypoplasia/aplasia 
Show

 HP:0008872 Feeding problems in infancy 
Show

 HP:0009466 Radial deviation of fingers 
Show

 HP:0009473 Joint contractures involving the joints of the hand 
Show

 HP:0009755 Ankyloblepharon "Adhesion of the ciliary edges of the eyelids to each other." [HPO:curators]
Show

 HP:0009778 Hypoplastic/small thumb 
Show

 HP:0009943 Complete duplication of the phalanges of the thumb "A complete duplication affecting one or more of the phalanges of the thumb. As opposed to a partial duplication were there is still a variable degree of fusion between the duplicated bones, a complete duplication leads to two separate bones appearing side to side (radio-ulnar axis) as seen on x-rays. A duplication leading to an accesory bone appearing in the proximo-distal axis on x-rays, this is actually a different entity called a Pseudoepiphyses (see according terms) sometimes also refered to as Hyperphalangism." [HPO:curators]
Show

 HP:0010327 Joint contractures of the 2nd toe 
Show

 HP:0010339 Joint contractures of the 4th toe 
Show

 HP:0010722 Asymmetry of the ears "A difference in size or shape between the left and right `ear` (FMA:52780 )." [HPO:probinson]
Show

 HP:0011069 Increased number of teeth "The presence of a `supernumerary` (PATO:0000470), i.e., extra, `tooth` (FMA:12516) or teeth." [HPO:ibailleulforestier]
Show

 HP:0011090 Fused teeth "The union of two separately developing tooth germs typically leading to one less tooth than normal in the affected dental arch." [pmid:18167487]
Show

 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
Show

 HP:0020006 Ciliary body coloboma "A `coloboma` (HP:0000589) of the ciliary body." []
Show

 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
Show

 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
Show

 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
Show

 HP:0100716 Autoagression "Aggression towards oneself." [HPO:sdoelken]
Show

 HP:0100818 Long thorax 
Show

 HP:0200021 Rounded shoulders 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr