ENSG00000196091


Homo sapiens

Features
Gene ID: ENSG00000196091
  
Biological name :MYBPC1
  
Synonyms : MYBPC1 / myosin binding protein C, slow type / Q00872
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q23.2
Gene start: 101568353
Gene end: 101686018
  
Corresponding Affymetrix probe sets: 214087_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449702
Ensembl peptide - ENSP00000447900
Ensembl peptide - ENSP00000448175
Ensembl peptide - ENSP00000354845
Ensembl peptide - ENSP00000354849
Ensembl peptide - ENSP00000376665
Ensembl peptide - ENSP00000400908
Ensembl peptide - ENSP00000440034
Ensembl peptide - ENSP00000442847
Ensembl peptide - ENSP00000446128
Ensembl peptide - ENSP00000447116
Ensembl peptide - ENSP00000447362
Ensembl peptide - ENSP00000447404
Ensembl peptide - ENSP00000447660
NCBI entrez gene - 4604     See in Manteia.
OMIM - 160794
RefSeq - XM_017019322
RefSeq - XM_005268876
RefSeq - XM_006719405
RefSeq - XM_006719406
RefSeq - XM_006719407
RefSeq - XM_006719408
RefSeq - XM_006719409
RefSeq - XM_006719410
RefSeq - XM_006719411
RefSeq - XM_017019315
RefSeq - XM_017019316
RefSeq - XM_017019317
RefSeq - XM_017019318
RefSeq - XM_017019319
RefSeq - XM_017019320
RefSeq - XM_017019321
RefSeq - NM_001254718
RefSeq - NM_001254719
RefSeq - NM_001254720
RefSeq - NM_001254721
RefSeq - NM_001254722
RefSeq - NM_001254723
RefSeq - NM_002465
RefSeq - NM_206819
RefSeq - NM_206820
RefSeq - NM_206821
RefSeq Peptide - NP_001241648
RefSeq Peptide - NP_002456
RefSeq Peptide - NP_996555
RefSeq Peptide - NP_996556
RefSeq Peptide - NP_996557
RefSeq Peptide - NP_001241647
RefSeq Peptide - NP_001241649
RefSeq Peptide - NP_001241650
RefSeq Peptide - NP_001241651
RefSeq Peptide - NP_001241652
swissprot - F8W1Z9
swissprot - G3V1V7
swissprot - F8VZE0
swissprot - F8VZY0
swissprot - Q00872
Ensembl - ENSG00000196091
  
Related genetic diseases (OMIM): 614335 - Arthrogryposis, distal, type 1B, 614335
  614915 - Lethal congenital contracture syndrome 4, 614915
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mybpc1ENSDARG00000045560Danio rerio
 MYBPC1ENSGALG00000012783Gallus gallus
 Mybpc1ENSMUSG00000020061Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYBPC3 / Q14896 / myosin binding protein C, cardiacENSG0000013457149
MYBPC2 / Q14324 / myosin binding protein C, fast typeENSG0000008696748
IGSF22 / Q8N9C0 / immunoglobulin superfamily member 22ENSG0000017905725
IGFN1 / Q86VF2 / immunoglobulin-like and fibronectin type III domain containing 1ENSG0000016339524
MYBPH / Q13203 / myosin binding protein HENSG0000013305520
MYOM1 / P52179 / myomesin 1ENSG0000010160518
MYOM2 / P54296 / myomesin 2ENSG0000003644818
MYOM3 / Q5VTT5 / myomesin 3ENSG0000014266117
A2RUH7 / MYBPHL / myosin binding protein H likeENSG0000022198615


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IEA
 biological_processGO:0006941 striated muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030049 muscle filament sliding TAS
 biological_processGO:0045214 sarcomere organization IBA
 biological_processGO:0071688 striated muscle myosin thick filament assembly IBA
 biological_processGO:1903955 positive regulation of protein targeting to mitochondrion IMP
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005859 muscle myosin complex IBA
 cellular_componentGO:0030016 myofibril ISS
 cellular_componentGO:0030018 Z disc IBA
 cellular_componentGO:0031430 M band IBA
 cellular_componentGO:0032982 myosin filament IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008307 structural constituent of muscle TAS
 molecular_functionGO:0031432 titin binding ISS
 molecular_functionGO:0051015 actin filament binding IBA
 molecular_functionGO:0051371 muscle alpha-actinin binding IBA
 molecular_functionGO:0097493 structural molecule activity conferring elasticity IBA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
Show

 HP:0001181 Adducted thumbs 
Show

 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
Show

 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
Show

 HP:0001838 Vertical talus 
Show

 HP:0001883 Talipes 
Show

 HP:0002804 Arthrogryposis multiplex congenita 
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003272 Abnormality of the hip "An abnormality of the hip joint or the surrounding anatomic region." [HPO:curators]
Show

 HP:0003812 Phenotypic variability 
Show

 HP:0005684 Distal arthrogryposis 
Show

 HP:0008366 Contractures involving the joints of the feet 
Show

 HP:0009465 Ulnar deviation of fingers 
Show

 HP:0009473 Joint contractures involving the joints of the hand 
Show

 HP:0010557 Overlapping fingers "Overlapping of the fingers occuring as the result of a deviation of the fingers from their normal position." [HPO:curators]
Show

 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
Show

 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000111245 MYL2 / P10916 / myosin light chain 2  / complex
 ENSG00000160808 MYL3 / P08590 / myosin light chain 3  / complex
 ENSG00000168530 MYL1 / P05976 / myosin light chain 1  / complex
 ENSG00000198336 MYL4 / P12829 / myosin light chain 4  / complex
 ENSG00000197616 MYH6 / P13533 / myosin heavy chain 6  / complex / reaction
 ENSG00000109063 MYH3 / P11055 / myosin heavy chain 3  / complex / reaction
 ENSG00000155657 TTN / titin / Q8WZ42  / complex
 ENSG00000133020 MYH8 / P13535 / myosin heavy chain 8  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr