ENSG00000204897


Homo sapiens

Features
Gene ID: ENSG00000204897
  
Biological name :KRT25
  
Synonyms : keratin 25 / KRT25 / Q7Z3Z0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.2
Gene start: 40748021
Gene end: 40755332
  
Corresponding Affymetrix probe sets: 237905_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000310573
NCBI entrez gene - 147183     See in Manteia.
OMIM - 616646
RefSeq - NM_181534
RefSeq - XM_011524414
RefSeq Peptide - NP_853512
swissprot - Q7Z3Z0
Ensembl - ENSG00000204897
  
Related genetic diseases (OMIM): 616760 - Woolly hair, autosomal recessive 3, 616760
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyt1ENSDARG00000092947Danio rerio
 cyt1lENSDARG00000036832Danio rerio
 krt1-19dENSDARG00000023082Danio rerio
 krt15ENSDARG00000036840Danio rerio
 krt17ENSDARG00000094041Danio rerio
 krt91ENSDARG00000036830Danio rerio
 krt92ENSDARG00000036834Danio rerio
 krt93ENSDARG00000044976Danio rerio
 krt94ENSDARG00000044975Danio rerio
 krt95ENSDARG00000014356Danio rerio
 krt96ENSDARG00000095147Danio rerio
 krt97ENSDARG00000000212Danio rerio
 krtt1c19eENSDARG00000090268Danio rerio
 si:ch211-156l18.7ENSDARG00000022334Danio rerio
 Krt25ENSMUSG00000035831Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT27 / Q7Z3Y8 / keratin 27ENSG0000017144682
KRT28 / Q7Z3Y7 / keratin 28ENSG0000017390875
KRT26 / Q7Z3Y9 / keratin 26ENSG0000018639371
KRT24 / Q2M2I5 / keratin 24ENSG0000016791655
KRT10 / P13645 / keratin 10ENSG0000018639555
KRT16 / P08779 / keratin 16ENSG0000018683251
KRT12 / Q99456 / keratin 12ENSG0000018724249
KRT14 / P02533 / keratin 14ENSG0000018684749
KRT15 / P19012 / keratin 15ENSG0000017134648
KRT13 / P13646 / keratin 13ENSG0000017140147
KRT17 / Q04695 / keratin 17ENSG0000012842245
KRT19 / P08727 / keratin 19ENSG0000017134543


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IDA
 biological_processGO:0007568 aging IDA
 biological_processGO:0031069 hair follicle morphogenesis IEA
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0042633 hair cycle IDA
 biological_processGO:0045109 intermediate filament organization IEA
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IMP


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000479 Abnormality of the retina 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000615 Abnormality of the pupils 
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002212 Curly hair 
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 HP:0002213 Fine hair 
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 HP:0002217 Slow-growing hair 
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 HP:0002224 Woolly hair 
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 HP:0002231 Sparse body hair "Sparseness of the body hair." [HPO:probinson]
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 HP:0002299 Fine, brittle hair 
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 HP:0005338 Sparse lateral eyebrows 
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 HP:0005599 Hair hypopigmentation 
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 HP:0009886 Trichorrhexis nodosa "Trichorrhexis nodosa is the formation of nodes along the hair shaft through which breakage readily occurs. It is thus a focal defect in the hair fiber that is characterized by thickening or weak points (nodes) that cause the hair to break off easily. The result is defective, abnormally fragile hair." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000171446 KRT27 / Q7Z3Y8 / keratin 27  / reaction / - / complex
 ENSG00000173908 KRT28 / Q7Z3Y7 / keratin 28  / - / complex / reaction
 ENSG00000204897 KRT25 / Q7Z3Z0 / keratin 25  / complex / reaction / -
 ENSG00000143631 FLG / P20930 / filaggrin  / complex / reaction / -
 ENSG00000186393 KRT26 / Q7Z3Y9 / keratin 26  / - / complex / reaction






 

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