ENSDARG00000036832


Danio rerio

Features
Gene ID: ENSDARG00000036832
  
Biological name :cyt1l
  
Synonyms : cyt1l / type I cytokeratin, enveloping layer, like
  
Possible biological names infered from orthology : A1L317 / A6BLY7 / keratin 10 / keratin 12 / keratin 13 / keratin 14 / keratin 15 / keratin 16 / keratin 17 / keratin 19 / keratin 24 / keratin 25 / keratin 26 / keratin 27 / keratin 28 / Keratin, type I cytoskeletal 13 / Keratin, type I cytoskeletal 14 / Keratin, type I cytoskeletal 17 / Keratin, type I cytoskeletal 19 / Keratin, type I cytoskeletal 24 / Keratin, type I cytoskeletal 25 / Keratin, type I cytoskeletal 27 / Keratin, type I cytoskeletal 28 / Keratin, type I cytoskeletal 42 / KRT10 / KRT12 / KRT13 / KRT14 / KRT15 / KRT16 / KRT17 / KRT19 / KRT24 / KRT25 / KRT26 / KRT27 / KRT28 / Krt42 / P02533 / P08727 / P08730 / P08779 / P13645 / P13646 / P19001 / P19012 / Q04695 / Q2M2I5 / Q61781 / Q6IFX2 / Q7Z3Y7 / Q7Z3Y8 / Q7Z3Y9 / Q7Z3Z0 / Q8VCW2 / Q99456 / Q9QWL7 / Q9Z2K1 / Q9Z320
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 5356421
Gene end: 5358455
  
Corresponding Affymetrix probe sets: Dr.24292.1.S1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095806
Ensembl peptide - ENSDARP00000125768
NCBI entrez gene - 792062     See in Manteia.
RefSeq - NM_001082882
RefSeq Peptide - NP_001076351
swissprot - I3ISA0
swissprot - Q1LXJ7
ZFIN ID - ZDB-GENE-061026-4
Ensembl - ENSDARG00000036832
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000036846Gallus gallus
 ENSGALG00000041858Gallus gallus
 ENSGALG00000034054Gallus gallus
 ENSGALG00000040050Gallus gallus
 ENSGALG00000034349Gallus gallus
 KRT12ENSGALG00000019715Gallus gallus
 KRT15ENSGALG00000019718Gallus gallus
 KRT17ENSGALG00000003690Gallus gallus
 KRT19ENSGALG00000019719Gallus gallus
 KRT10ENSG00000186395Homo sapiens
 KRT12ENSG00000187242Homo sapiens
 KRT13ENSG00000171401Homo sapiens
 KRT14ENSG00000186847Homo sapiens
 KRT15ENSG00000171346Homo sapiens
 KRT16ENSG00000186832Homo sapiens
 KRT17ENSG00000128422Homo sapiens
 KRT19ENSG00000171345Homo sapiens
 KRT24ENSG00000167916Homo sapiens
 KRT25ENSG00000204897Homo sapiens
 KRT26ENSG00000186393Homo sapiens
 KRT27ENSG00000171446Homo sapiens
 KRT28ENSG00000173908Homo sapiens
 Krt10ENSMUSG00000019761Mus musculus
 Krt12ENSMUSG00000020912Mus musculus
 Krt13ENSMUSG00000044041Mus musculus
 Krt14ENSMUSG00000045545Mus musculus
 Krt15ENSMUSG00000054146Mus musculus
 Krt16ENSMUSG00000053797Mus musculus
 Krt17ENSMUSG00000035557Mus musculus
 Krt19ENSMUSG00000020911Mus musculus
 Krt24ENSMUSG00000020913Mus musculus
 Krt25ENSMUSG00000035831Mus musculus
 Krt27ENSMUSG00000017588Mus musculus
 Krt28ENSMUSG00000055937Mus musculus
 Krt42ENSMUSG00000053654Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cyt1 / type I cytokeratin, enveloping layer / KRT28* / KRT27* / KRT26* / KRT25* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT12* / KRT13* / KRT10* / Krt42* / Q7Z3Y9* / A6BLY7*...ENSDARG0000009294799
krt17 / keratin 17 / KRT28* / KRT27* / KRT26* / KRT25* / KRT24* / KRT19* / KRT16* / KRT15* / KRT14* / KRT12* / KRT13* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P08730* / P...ENSDARG0000009404188
krt92 / keratin 92 / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P0...ENSDARG0000003683487
krt91 / keratin 91 / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P0...ENSDARG0000003683084
krt15 / keratin 15 / KRT28* / KRT27* / KRT26* / KRT25* / KRT24* / KRT19* / KRT17* / KRT16* / KRT14* / KRT12* / KRT13* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P08730* / P...ENSDARG0000003684071
krtt1c19e / keratin type 1 c19e / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* /...ENSDARG0000009026866
krt1-19d / keratin, type 1, gene 19d / Krt42* / KRT28* / KRT27* / KRT26* / KRT25* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT12* / KRT10* / Q9Z320* / A6BLY7* / P025...ENSDARG0000002308265
krt97 / keratin 97 / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P0...ENSDARG0000000021257
krt96 / keratin 96 / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P0...ENSDARG0000009514752
krt93 / keratin 93 / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P0...ENSDARG0000004497651
krt94 / keratin 94 / KRT28* / KRT27* / KRT26* / KRT12* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT25* / KRT10* / Krt42* / Q9Z320* / A6BLY7* / P02533* / P08727* / P0...ENSDARG0000004497551
si:ch211-156l18.7 / Krt42* / KRT28* / KRT27* / KRT26* / KRT25* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT12* / KRT13* / KRT10* / Q7Z3Y9* / A6BLY7* / P02533* / P08727* / P08...ENSDARG0000002233444
krt95 / kertain 95 / si:ch211-156l18.7 / KRT26* / KRT25* / KRT24* / KRT19* / KRT17* / KRT16* / KRT15* / KRT14* / KRT13* / KRT10* / KRT12* / Krt42* / KRT28* / KRT27* / Q7Z3Y9* / A6BLY7* / P0...ENSDARG0000001435643


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Type I hemidesmosome assembly
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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