ENSGALG00000003690


Gallus gallus

Features
Gene ID: ENSGALG00000003690
  
Biological name :KRT17
  
Synonyms : keratin, type I cytoskeletal 14 / KRT17
  
Possible biological names infered from orthology : keratin 14 / keratin 16 / keratin 17 / Keratin, type I cytoskeletal 17 / Keratin, type I cytoskeletal 42 / KRT14 / KRT16 / Krt42 / P02533 / P08779 / Q04695 / Q61781 / Q6IFX2 / Q9QWL7 / Q9Z2K1
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 5042180
Gene end: 5052819
  
Corresponding Affymetrix probe sets: Gga.16196.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044941
Ensembl peptide - ENSGALP00000005836
Ensembl peptide - ENSGALP00000063827
Ensembl peptide - ENSGALP00000062771
Ensembl peptide - ENSGALP00000061121
Ensembl peptide - ENSGALP00000058299
Ensembl peptide - ENSGALP00000057814
NCBI entrez gene - 100858439     See in Manteia.
NCBI entrez gene - 408039     See in Manteia.
RefSeq - NM_001001311
RefSeq - NM_001277984
RefSeq Peptide - NP_001001311
RefSeq Peptide - NP_001264913
swissprot - A0A1D5PXW6
swissprot - A0A1L1RYA4
swissprot - F1NPR7
swissprot - A0A1D5NX48
swissprot - A0A1L1RVB6
swissprot - A0A1L1RQP9
swissprot - A0A1D5PZ89
Ensembl - ENSGALG00000003690
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyt1ENSDARG00000092947Danio rerio
 cyt1lENSDARG00000036832Danio rerio
 krt1-19dENSDARG00000023082Danio rerio
 krt15ENSDARG00000036840Danio rerio
 krt17ENSDARG00000094041Danio rerio
 krt91ENSDARG00000036830Danio rerio
 krt92ENSDARG00000036834Danio rerio
 krt93ENSDARG00000044976Danio rerio
 krt94ENSDARG00000044975Danio rerio
 krt95ENSDARG00000014356Danio rerio
 krt96ENSDARG00000095147Danio rerio
 krt97ENSDARG00000000212Danio rerio
 krtt1c19eENSDARG00000090268Danio rerio
 si:ch211-156l18.7ENSDARG00000022334Danio rerio
 KRT14ENSG00000186847Homo sapiens
 KRT16ENSG00000186832Homo sapiens
 KRT17ENSG00000128422Homo sapiens
 Krt14ENSMUSG00000045545Mus musculus
 Krt16ENSMUSG00000053797Mus musculus
 Krt17ENSMUSG00000035557Mus musculus
 Krt42ENSMUSG00000053654Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT19 / keratin 19 / P08727* / P19001* / Keratin, type I cytoskeletal 19 *ENSGALG0000001971962
KRT15 / keratin, type I cytoskeletal 15 / KRT13* / P08730* / P13646* / P19012* / keratin 15* / keratin 13* / Keratin, type I cytoskeletal 13 *ENSGALG0000001971858
KRT12 / keratin 12 / Q99456*ENSGALG0000001971553
ENSGALG0000003405449
ENSGALG0000003434948
ENSGALG0000003684647
ENSGALG0000004005036
ENSGALG0000004185830


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR009053  Prefoldin
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Type I hemidesmosome assembly
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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