ENSMUSG00000044041


Mus musculus

Features
Gene ID: ENSMUSG00000044041
  
Biological name :Krt13
  
Synonyms : Keratin, type I cytoskeletal 13 / Krt13 / P08730
  
Possible biological names infered from orthology : keratin 13 / P13646
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: D
Gene start: 100117327
Gene end: 100121566
  
Corresponding Affymetrix probe sets: 10391013 (MoGene1.0st)   1422454_at (Mouse Genome 430 2.0 Array)   1437344_x_at (Mouse Genome 430 2.0 Array)   1441863_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000007275
NCBI entrez gene - 16663     See in Manteia.
MGI - MGI:101925
RefSeq - NM_010662
RefSeq - NM_001313949
RefSeq Peptide - NP_001300878
RefSeq Peptide - NP_034792
swissprot - P08730
Ensembl - ENSMUSG00000044041
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyt1ENSDARG00000092947Danio rerio
 cyt1lENSDARG00000036832Danio rerio
 krt1-19dENSDARG00000023082Danio rerio
 krt15ENSDARG00000036840Danio rerio
 krt17ENSDARG00000094041Danio rerio
 krt91ENSDARG00000036830Danio rerio
 krt92ENSDARG00000036834Danio rerio
 krt93ENSDARG00000044976Danio rerio
 krt94ENSDARG00000044975Danio rerio
 krt95ENSDARG00000014356Danio rerio
 krt96ENSDARG00000095147Danio rerio
 krt97ENSDARG00000000212Danio rerio
 krtt1c19eENSDARG00000090268Danio rerio
 si:ch211-156l18.7ENSDARG00000022334Danio rerio
 KRT15ENSGALG00000019718Gallus gallus
 KRT13ENSG00000171401Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Krt15 / keratin 15 / P19012*ENSMUSG0000005414675
Krt14 / Q61781 / Keratin, type I cytoskeletal 14 ENSMUSG0000004554564
Krt16 / Q9Z2K1 / keratin 16 / P08779*ENSMUSG0000005379762
Krt10 / keratin 10 / P13645*ENSMUSG0000001976161
Krt42 / Q6IFX2 / Keratin, type I cytoskeletal 42 ENSMUSG0000005365461
Krt19 / P19001 / Keratin, type I cytoskeletal 19 / P08727* / keratin 19*ENSMUSG0000002091159
Krt17 / Q9QWL7 / Keratin, type I cytoskeletal 17 / Q04695* / keratin 17*ENSMUSG0000003555759
Krt24 / A1L317 / Keratin, type I cytoskeletal 24 / Q2M2I5* / keratin 24*ENSMUSG0000002091354
Krt12 / keratin 12 / Q99456*ENSMUSG0000002091253
Krt28 / A6BLY7 / Keratin, type I cytoskeletal 28 / Q7Z3Y7* / keratin 28*ENSMUSG0000005593751
Krt27 / Q9Z320 / Keratin, type I cytoskeletal 27 / Q7Z3Y8* / keratin 27*ENSMUSG0000001758849
Krt25 / Q8VCW2 / Keratin, type I cytoskeletal 25 / Q7Z3Z0* / keratin 25*ENSMUSG0000003583148


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0009314 response to radiation IEA
 biological_processGO:0043587 tongue morphogenesis IEA
 biological_processGO:0071300 cellular response to retinoic acid IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 cellular_componentGO:0070062 extracellular exosome ISO
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr