ENSG00000228716


Homo sapiens

Features
Gene ID: ENSG00000228716
  
Biological name :DHFR
  
Synonyms : DHFR / dihydrofolate reductase / P00374
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q14.1
Gene start: 80626228
Gene end: 80654983
  
Corresponding Affymetrix probe sets: 202532_s_at (Human Genome U133 Plus 2.0 Array)   202533_s_at (Human Genome U133 Plus 2.0 Array)   202534_x_at (Human Genome U133 Plus 2.0 Array)   48808_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000421334
Ensembl peptide - ENSP00000426474
Ensembl peptide - ENSP00000422732
Ensembl peptide - ENSP00000396308
NCBI entrez gene - 1719     See in Manteia.
OMIM - 126060
RefSeq - NM_000791
RefSeq - NM_001290354
RefSeq - NM_001290357
RefSeq Peptide - NP_001277283
RefSeq Peptide - NP_001277286
RefSeq Peptide - NP_000782
swissprot - P00374
swissprot - B0YJ76
swissprot - B4DM58
Ensembl - ENSG00000228716
  
Related genetic diseases (OMIM): 613839 - Megaloblastic anemia due to dihydrofolate reductase deficiency, 613839
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhfrENSDARG00000004251Danio rerio
 DHFRENSGALG00000026757Gallus gallus
 DhfrENSMUSG00000021707Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DHFR2 / Q86XF0 / dihydrofolate reductase 2ENSG0000017870092


Protein motifs (from Interpro)
Interpro ID Name
 IPR001796  Dihydrofolate reductase domain
 IPR012259  Dihydrofolate reductase
 IPR017925  Dihydrofolate reductase conserved site
 IPR024072  Dihydrofolate reductase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle TAS
 biological_processGO:0006545 glycine biosynthetic process IEA
 biological_processGO:0006729 tetrahydrobiopterin biosynthetic process ISS
 biological_processGO:0006730 one-carbon metabolic process IEA
 biological_processGO:0017148 negative regulation of translation IDA
 biological_processGO:0031103 axon regeneration ISS
 biological_processGO:0031427 response to methotrexate IEA
 biological_processGO:0046452 dihydrofolate metabolic process IDA
 biological_processGO:0046653 tetrahydrofolate metabolic process IDA
 biological_processGO:0046654 tetrahydrofolate biosynthetic process IDA
 biological_processGO:0046655 folic acid metabolic process ISS
 biological_processGO:0051000 positive regulation of nitric-oxide synthase activity ISS
 biological_processGO:0055114 oxidation-reduction process IDA
 biological_processGO:2000121 regulation of removal of superoxide radicals ISS
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0000900 translation repressor activity, mRNA regulatory element binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IDA
 molecular_functionGO:0004146 dihydrofolate reductase activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005542 folic acid binding IDA
 molecular_functionGO:0008144 drug binding IDA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0033560 folate reductase activity TAS
 molecular_functionGO:0050661 NADP binding IEA
 molecular_functionGO:0051870 methotrexate binding IDA
 molecular_functionGO:0070402 NADPH binding IDA
 molecular_functionGO:1990825 sequence-specific mRNA binding IDA


Pathways (from Reactome)
Pathway description
Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
Metabolism of folate and pterines
Activation of E2F1 target genes at G1/S


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
Show

 HP:0000980 Pallor 
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001873 Thrombocytopenia 
Show

 HP:0001876 Pancytopenia 
Show

 HP:0001889 Megaloblastic anemia 
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002121 Absence seizures "Recurrent absence seizures are `generalized seizures` (HP:0002197) that are characterized by a sudden cessation of motor activity and by a blank facial expression with flickering of the eyelids. There is no convulsive muscular activity or loss of postural control." [HPO:probinson]
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0002421 Poor head control 
Show

 HP:0003828 Variable expressivity 
Show

 HP:0005484 Microcephaly, postnatal 
Show

 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
Show

 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
Show

 HP:0025097 Eyelid myoclonus "Marked, involuntary jerking of the eyelids." []
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000228716 DHFR / P00374 / dihydrofolate reductase  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr