ENSG00000257103


Homo sapiens

Features
Gene ID: ENSG00000257103
  
Biological name :LSM14A
  
Synonyms : LSM14A / LSM14A, mRNA processing body assembly factor / Q8ND56
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.11
Gene start: 34172504
Gene end: 34229515
  
Corresponding Affymetrix probe sets: 212131_at (Human Genome U133 Plus 2.0 Array)   212132_at (Human Genome U133 Plus 2.0 Array)   222099_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468130
Ensembl peptide - ENSP00000466725
Ensembl peptide - ENSP00000485334
Ensembl peptide - ENSP00000413964
Ensembl peptide - ENSP00000446271
Ensembl peptide - ENSP00000446451
NCBI entrez gene - 26065     See in Manteia.
OMIM - 610677
RefSeq - XM_017026577
RefSeq - XM_005258719
RefSeq - XM_005258720
RefSeq - XM_005258721
RefSeq - XM_011526708
RefSeq - XM_017026575
RefSeq - XM_017026576
RefSeq - NM_001114093
RefSeq - NM_015578
RefSeq Peptide - NP_001107565
RefSeq Peptide - NP_056393
swissprot - I3L4Q1
swissprot - K7EMZ9
swissprot - Q8ND56
swissprot - A0A096LP11
Ensembl - ENSG00000257103
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lsm14aaENSDARG00000006600Danio rerio
 lsm14abENSDARG00000100553Danio rerio
 LSM14AENSGALG00000004935Gallus gallus
 A ENSMUSG00000066568Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LSM14B / Q9BX40 / LSM family member 14BENSG0000014965747


Protein motifs (from Interpro)
Interpro ID Name
 IPR010920  LSM domain superfamily
 IPR019050  FDF domain
 IPR025609  Lsm14-like, N-terminal
 IPR025761  FFD box
 IPR025762  DFDF domain
 IPR025768  TFG box


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0033962 cytoplasmic mRNA processing body assembly IMP
 biological_processGO:0039529 RIG-I signaling pathway IEA
 biological_processGO:0051607 defense response to virus IEA
 biological_processGO:0060340 positive regulation of type I interferon-mediated signaling pathway IEA
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IDA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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